Protein–RNA interactions for Protein: Q61180

Scnn1a, Amiloride-sensitive sodium channel subunit alpha, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1aQ61180 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scnn1aQ61180 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
Scnn1aQ61180 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scnn1aQ61180 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scnn1aQ61180 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scnn1aQ61180 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scnn1aQ61180 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scnn1aQ61180 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scnn1aQ61180 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scnn1aQ61180 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Scnn1aQ61180 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Scnn1aQ61180 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC17.85■□□□□ 0.45
Scnn1aQ61180 Gm26308-201ENSMUST00000157768 69 ntBASIC17.85■□□□□ 0.45
Scnn1aQ61180 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Scnn1aQ61180 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Scnn1aQ61180 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scnn1aQ61180 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scnn1aQ61180 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scnn1aQ61180 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
Scnn1aQ61180 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scnn1aQ61180 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scnn1aQ61180 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.84■□□□□ 0.45
Scnn1aQ61180 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scnn1aQ61180 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.84■□□□□ 0.45
Scnn1aQ61180 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scnn1aQ61180 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC17.84■□□□□ 0.45
Scnn1aQ61180 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scnn1aQ61180 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scnn1aQ61180 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC17.84■□□□□ 0.45
Scnn1aQ61180 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC17.84■□□□□ 0.45
Scnn1aQ61180 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Scnn1aQ61180 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Scnn1aQ61180 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Scnn1aQ61180 Gm45612-201ENSMUST00000211320 160 ntBASIC17.84■□□□□ 0.45
Scnn1aQ61180 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scnn1aQ61180 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scnn1aQ61180 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Scnn1aQ61180 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Scnn1aQ61180 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Scnn1aQ61180 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Scnn1aQ61180 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scnn1aQ61180 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scnn1aQ61180 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scnn1aQ61180 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Scnn1aQ61180 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scnn1aQ61180 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC17.83■□□□□ 0.44
Scnn1aQ61180 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scnn1aQ61180 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scnn1aQ61180 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Scnn1aQ61180 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scnn1aQ61180 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Scnn1aQ61180 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scnn1aQ61180 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scnn1aQ61180 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Scnn1aQ61180 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scnn1aQ61180 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scnn1aQ61180 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scnn1aQ61180 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Scnn1aQ61180 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Scnn1aQ61180 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scnn1aQ61180 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scnn1aQ61180 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Scnn1aQ61180 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Scnn1aQ61180 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scnn1aQ61180 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scnn1aQ61180 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Scnn1aQ61180 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC17.82■□□□□ 0.44
Scnn1aQ61180 Gm7556-201ENSMUST00000201178 1084 ntBASIC17.82■□□□□ 0.44
Scnn1aQ61180 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scnn1aQ61180 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC17.82■□□□□ 0.44
Scnn1aQ61180 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scnn1aQ61180 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scnn1aQ61180 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scnn1aQ61180 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scnn1aQ61180 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Scnn1aQ61180 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scnn1aQ61180 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Scnn1aQ61180 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scnn1aQ61180 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Scnn1aQ61180 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC17.81■□□□□ 0.44
Scnn1aQ61180 Gm27494-201ENSMUST00000184735 189 ntBASIC17.81■□□□□ 0.44
Scnn1aQ61180 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scnn1aQ61180 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Scnn1aQ61180 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scnn1aQ61180 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC17.8■□□□□ 0.44
Scnn1aQ61180 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Scnn1aQ61180 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Scnn1aQ61180 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scnn1aQ61180 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scnn1aQ61180 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC17.8■□□□□ 0.44
Scnn1aQ61180 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Scnn1aQ61180 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scnn1aQ61180 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC17.8■□□□□ 0.44
Scnn1aQ61180 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Scnn1aQ61180 Mir1895-201ENSMUST00000122615 79 ntBASIC17.8■□□□□ 0.44
Scnn1aQ61180 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC17.8■□□□□ 0.44
Scnn1aQ61180 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC17.8■□□□□ 0.44
Scnn1aQ61180 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scnn1aQ61180 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scnn1aQ61180 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms