Protein–RNA interactions for Protein: Q60778

Nfkbib, NF-kappa-B inhibitor beta, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NfkbibQ60778 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
NfkbibQ60778 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NfkbibQ60778 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NfkbibQ60778 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
NfkbibQ60778 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NfkbibQ60778 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NfkbibQ60778 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC18.65■□□□□ 0.58
NfkbibQ60778 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NfkbibQ60778 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NfkbibQ60778 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NfkbibQ60778 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC18.65■□□□□ 0.58
NfkbibQ60778 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NfkbibQ60778 Gm7556-201ENSMUST00000201178 1084 ntBASIC18.65■□□□□ 0.58
NfkbibQ60778 AC132104.2-201ENSMUST00000215011 266 ntBASIC18.65■□□□□ 0.58
NfkbibQ60778 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NfkbibQ60778 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NfkbibQ60778 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
NfkbibQ60778 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC18.65■□□□□ 0.58
NfkbibQ60778 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
NfkbibQ60778 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
NfkbibQ60778 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NfkbibQ60778 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NfkbibQ60778 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NfkbibQ60778 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
NfkbibQ60778 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
NfkbibQ60778 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
NfkbibQ60778 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.58
NfkbibQ60778 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
NfkbibQ60778 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
NfkbibQ60778 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
NfkbibQ60778 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NfkbibQ60778 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.64■□□□□ 0.57
NfkbibQ60778 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NfkbibQ60778 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NfkbibQ60778 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
NfkbibQ60778 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC18.64■□□□□ 0.57
NfkbibQ60778 Gm10499-201ENSMUST00000174094 934 ntBASIC18.64■□□□□ 0.57
NfkbibQ60778 Mir8117-201ENSMUST00000184773 107 ntBASIC18.64■□□□□ 0.57
NfkbibQ60778 Gm7229-201ENSMUST00000214719 1007 ntBASIC18.64■□□□□ 0.57
NfkbibQ60778 Gm18246-201ENSMUST00000221023 728 ntBASIC18.64■□□□□ 0.57
NfkbibQ60778 AC159295.1-201ENSMUST00000225326 940 ntBASIC18.64■□□□□ 0.57
NfkbibQ60778 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NfkbibQ60778 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NfkbibQ60778 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NfkbibQ60778 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
NfkbibQ60778 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
NfkbibQ60778 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NfkbibQ60778 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NfkbibQ60778 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NfkbibQ60778 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
NfkbibQ60778 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
NfkbibQ60778 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NfkbibQ60778 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
NfkbibQ60778 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NfkbibQ60778 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NfkbibQ60778 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC18.63■□□□□ 0.57
NfkbibQ60778 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NfkbibQ60778 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NfkbibQ60778 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC18.63■□□□□ 0.57
NfkbibQ60778 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NfkbibQ60778 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC18.63■□□□□ 0.57
NfkbibQ60778 Gm10175-201ENSMUST00000086013 645 ntBASIC18.63■□□□□ 0.57
NfkbibQ60778 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
NfkbibQ60778 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NfkbibQ60778 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NfkbibQ60778 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NfkbibQ60778 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NfkbibQ60778 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NfkbibQ60778 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NfkbibQ60778 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
NfkbibQ60778 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC18.62■□□□□ 0.57
NfkbibQ60778 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NfkbibQ60778 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NfkbibQ60778 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NfkbibQ60778 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NfkbibQ60778 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NfkbibQ60778 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NfkbibQ60778 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NfkbibQ60778 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NfkbibQ60778 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NfkbibQ60778 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NfkbibQ60778 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC18.62■□□□□ 0.57
NfkbibQ60778 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC18.62■□□□□ 0.57
NfkbibQ60778 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
NfkbibQ60778 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
NfkbibQ60778 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NfkbibQ60778 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC18.62■□□□□ 0.57
NfkbibQ60778 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NfkbibQ60778 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
NfkbibQ60778 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NfkbibQ60778 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NfkbibQ60778 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NfkbibQ60778 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NfkbibQ60778 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
NfkbibQ60778 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.61■□□□□ 0.57
NfkbibQ60778 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NfkbibQ60778 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NfkbibQ60778 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NfkbibQ60778 Gm45293-201ENSMUST00000209754 1812 ntBASIC18.61■□□□□ 0.57
NfkbibQ60778 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms