Protein–RNA interactions for Protein: Q5XF90

Atp13a4, Probable cation-transporting ATPase 13A4, mousemouse

Predictions only

Length 1,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp13a4Q5XF90 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atp13a4Q5XF90 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Atp13a4Q5XF90 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atp13a4Q5XF90 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Atp13a4Q5XF90 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Atp13a4Q5XF90 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atp13a4Q5XF90 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atp13a4Q5XF90 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.82■□□□□ 0.28
Atp13a4Q5XF90 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.82■□□□□ 0.28
Atp13a4Q5XF90 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.82■□□□□ 0.28
Atp13a4Q5XF90 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.82■□□□□ 0.28
Atp13a4Q5XF90 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.82■□□□□ 0.28
Atp13a4Q5XF90 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atp13a4Q5XF90 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atp13a4Q5XF90 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atp13a4Q5XF90 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Atp13a4Q5XF90 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Atp13a4Q5XF90 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atp13a4Q5XF90 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atp13a4Q5XF90 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atp13a4Q5XF90 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atp13a4Q5XF90 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Atp13a4Q5XF90 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atp13a4Q5XF90 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atp13a4Q5XF90 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atp13a4Q5XF90 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atp13a4Q5XF90 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atp13a4Q5XF90 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atp13a4Q5XF90 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
Atp13a4Q5XF90 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Atp13a4Q5XF90 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atp13a4Q5XF90 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
Atp13a4Q5XF90 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atp13a4Q5XF90 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atp13a4Q5XF90 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atp13a4Q5XF90 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Atp13a4Q5XF90 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atp13a4Q5XF90 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atp13a4Q5XF90 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Atp13a4Q5XF90 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC16.81■□□□□ 0.28
Atp13a4Q5XF90 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.81■□□□□ 0.28
Atp13a4Q5XF90 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Atp13a4Q5XF90 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atp13a4Q5XF90 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Atp13a4Q5XF90 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atp13a4Q5XF90 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atp13a4Q5XF90 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC16.81■□□□□ 0.28
Atp13a4Q5XF90 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atp13a4Q5XF90 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atp13a4Q5XF90 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atp13a4Q5XF90 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.8■□□□□ 0.28
Atp13a4Q5XF90 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Atp13a4Q5XF90 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Atp13a4Q5XF90 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
Atp13a4Q5XF90 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atp13a4Q5XF90 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Atp13a4Q5XF90 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Atp13a4Q5XF90 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Atp13a4Q5XF90 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atp13a4Q5XF90 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atp13a4Q5XF90 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.8■□□□□ 0.28
Atp13a4Q5XF90 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Atp13a4Q5XF90 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.8■□□□□ 0.28
Atp13a4Q5XF90 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
Atp13a4Q5XF90 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.8■□□□□ 0.28
Atp13a4Q5XF90 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.8■□□□□ 0.28
Atp13a4Q5XF90 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atp13a4Q5XF90 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atp13a4Q5XF90 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atp13a4Q5XF90 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Atp13a4Q5XF90 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atp13a4Q5XF90 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Atp13a4Q5XF90 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Atp13a4Q5XF90 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atp13a4Q5XF90 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atp13a4Q5XF90 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atp13a4Q5XF90 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atp13a4Q5XF90 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.8■□□□□ 0.28
Atp13a4Q5XF90 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Atp13a4Q5XF90 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Atp13a4Q5XF90 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Atp13a4Q5XF90 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Atp13a4Q5XF90 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Atp13a4Q5XF90 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
Atp13a4Q5XF90 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Atp13a4Q5XF90 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC16.79■□□□□ 0.28
Atp13a4Q5XF90 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Atp13a4Q5XF90 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Atp13a4Q5XF90 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Atp13a4Q5XF90 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Atp13a4Q5XF90 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Atp13a4Q5XF90 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Atp13a4Q5XF90 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Atp13a4Q5XF90 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.79■□□□□ 0.28
Atp13a4Q5XF90 Gm15358-201ENSMUST00000119249 520 ntBASIC16.79■□□□□ 0.28
Atp13a4Q5XF90 Gm11452-201ENSMUST00000122376 690 ntBASIC16.79■□□□□ 0.28
Atp13a4Q5XF90 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Atp13a4Q5XF90 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.79■□□□□ 0.28
Atp13a4Q5XF90 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Atp13a4Q5XF90 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms