Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 AC084391.1-201ENSMUST00000200651 141 ntBASIC18.65■□□□□ 0.58
Vps54Q5SPW0 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC18.65■□□□□ 0.58
Vps54Q5SPW0 Psmb5-202ENSMUST00000227257 622 ntBASIC18.65■□□□□ 0.58
Vps54Q5SPW0 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps54Q5SPW0 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Vps54Q5SPW0 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps54Q5SPW0 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps54Q5SPW0 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps54Q5SPW0 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps54Q5SPW0 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC18.65■□□□□ 0.58
Vps54Q5SPW0 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps54Q5SPW0 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps54Q5SPW0 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Vps54Q5SPW0 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Vps54Q5SPW0 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vps54Q5SPW0 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Vps54Q5SPW0 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC18.64■□□□□ 0.57
Vps54Q5SPW0 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
Vps54Q5SPW0 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vps54Q5SPW0 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC18.64■□□□□ 0.57
Vps54Q5SPW0 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vps54Q5SPW0 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vps54Q5SPW0 Gm43514-201ENSMUST00000198852 424 ntBASIC18.64■□□□□ 0.57
Vps54Q5SPW0 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC18.64■□□□□ 0.57
Vps54Q5SPW0 AC151836.1-202ENSMUST00000226259 753 ntBASIC18.64■□□□□ 0.57
Vps54Q5SPW0 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Vps54Q5SPW0 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vps54Q5SPW0 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Vps54Q5SPW0 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Vps54Q5SPW0 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Vps54Q5SPW0 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vps54Q5SPW0 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Vps54Q5SPW0 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vps54Q5SPW0 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vps54Q5SPW0 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vps54Q5SPW0 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vps54Q5SPW0 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Vps54Q5SPW0 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vps54Q5SPW0 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps54Q5SPW0 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps54Q5SPW0 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps54Q5SPW0 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
Vps54Q5SPW0 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps54Q5SPW0 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps54Q5SPW0 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps54Q5SPW0 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps54Q5SPW0 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC18.63■□□□□ 0.57
Vps54Q5SPW0 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Vps54Q5SPW0 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Vps54Q5SPW0 Gm18489-201ENSMUST00000172565 551 ntBASIC18.63■□□□□ 0.57
Vps54Q5SPW0 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC18.63■□□□□ 0.57
Vps54Q5SPW0 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Vps54Q5SPW0 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC18.63■□□□□ 0.57
Vps54Q5SPW0 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC18.63■□□□□ 0.57
Vps54Q5SPW0 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps54Q5SPW0 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps54Q5SPW0 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps54Q5SPW0 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps54Q5SPW0 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps54Q5SPW0 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps54Q5SPW0 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps54Q5SPW0 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps54Q5SPW0 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Vps54Q5SPW0 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Vps54Q5SPW0 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps54Q5SPW0 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps54Q5SPW0 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps54Q5SPW0 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps54Q5SPW0 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps54Q5SPW0 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps54Q5SPW0 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC18.62■□□□□ 0.57
Vps54Q5SPW0 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Vps54Q5SPW0 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Vps54Q5SPW0 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC18.62■□□□□ 0.57
Vps54Q5SPW0 Gm43935-201ENSMUST00000203569 1050 ntBASIC18.62■□□□□ 0.57
Vps54Q5SPW0 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps54Q5SPW0 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps54Q5SPW0 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps54Q5SPW0 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Vps54Q5SPW0 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps54Q5SPW0 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps54Q5SPW0 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps54Q5SPW0 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps54Q5SPW0 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Vps54Q5SPW0 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vps54Q5SPW0 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Vps54Q5SPW0 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vps54Q5SPW0 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vps54Q5SPW0 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vps54Q5SPW0 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vps54Q5SPW0 AC163637.1-201ENSMUST00000215491 1894 ntBASIC18.61■□□□□ 0.57
Vps54Q5SPW0 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vps54Q5SPW0 Gm38318-201ENSMUST00000195769 1706 ntBASIC18.61■□□□□ 0.57
Vps54Q5SPW0 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Vps54Q5SPW0 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vps54Q5SPW0 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Vps54Q5SPW0 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC18.61■□□□□ 0.57
Vps54Q5SPW0 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Vps54Q5SPW0 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC18.61■□□□□ 0.57
Vps54Q5SPW0 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms