Protein–RNA interactions for Protein: Q5RJF7

Cacna2d4, Voltage-dependent calcium channel subunit alpha-2/delta-4, mousemouse

Predictions only

Length 1,116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna2d4Q5RJF7 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cacna2d4Q5RJF7 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC17.35■□□□□ 0.37
Cacna2d4Q5RJF7 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cacna2d4Q5RJF7 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cacna2d4Q5RJF7 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC17.35■□□□□ 0.37
Cacna2d4Q5RJF7 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC17.35■□□□□ 0.37
Cacna2d4Q5RJF7 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC17.35■□□□□ 0.37
Cacna2d4Q5RJF7 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.35■□□□□ 0.37
Cacna2d4Q5RJF7 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cacna2d4Q5RJF7 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cacna2d4Q5RJF7 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Cacna2d4Q5RJF7 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cacna2d4Q5RJF7 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cacna2d4Q5RJF7 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cacna2d4Q5RJF7 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cacna2d4Q5RJF7 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cacna2d4Q5RJF7 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cacna2d4Q5RJF7 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
Cacna2d4Q5RJF7 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cacna2d4Q5RJF7 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cacna2d4Q5RJF7 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cacna2d4Q5RJF7 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cacna2d4Q5RJF7 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cacna2d4Q5RJF7 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.34■□□□□ 0.37
Cacna2d4Q5RJF7 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC17.34■□□□□ 0.37
Cacna2d4Q5RJF7 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cacna2d4Q5RJF7 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Cacna2d4Q5RJF7 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Cacna2d4Q5RJF7 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cacna2d4Q5RJF7 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
Cacna2d4Q5RJF7 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC17.34■□□□□ 0.37
Cacna2d4Q5RJF7 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cacna2d4Q5RJF7 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cacna2d4Q5RJF7 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cacna2d4Q5RJF7 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cacna2d4Q5RJF7 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC17.34■□□□□ 0.37
Cacna2d4Q5RJF7 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cacna2d4Q5RJF7 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.34■□□□□ 0.37
Cacna2d4Q5RJF7 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.33■□□□□ 0.37
Cacna2d4Q5RJF7 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Cacna2d4Q5RJF7 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Cacna2d4Q5RJF7 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cacna2d4Q5RJF7 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
Cacna2d4Q5RJF7 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cacna2d4Q5RJF7 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cacna2d4Q5RJF7 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cacna2d4Q5RJF7 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cacna2d4Q5RJF7 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Cacna2d4Q5RJF7 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cacna2d4Q5RJF7 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cacna2d4Q5RJF7 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Cacna2d4Q5RJF7 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.33■□□□□ 0.36
Cacna2d4Q5RJF7 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cacna2d4Q5RJF7 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cacna2d4Q5RJF7 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC17.33■□□□□ 0.36
Cacna2d4Q5RJF7 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cacna2d4Q5RJF7 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cacna2d4Q5RJF7 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Cacna2d4Q5RJF7 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Cacna2d4Q5RJF7 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Cacna2d4Q5RJF7 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Cacna2d4Q5RJF7 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC17.32■□□□□ 0.36
Cacna2d4Q5RJF7 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cacna2d4Q5RJF7 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cacna2d4Q5RJF7 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cacna2d4Q5RJF7 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cacna2d4Q5RJF7 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cacna2d4Q5RJF7 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Cacna2d4Q5RJF7 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC17.32■□□□□ 0.36
Cacna2d4Q5RJF7 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC17.32■□□□□ 0.36
Cacna2d4Q5RJF7 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cacna2d4Q5RJF7 Prob1-201ENSMUST00000097619 3021 ntBASIC17.32■□□□□ 0.36
Cacna2d4Q5RJF7 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.32■□□□□ 0.36
Cacna2d4Q5RJF7 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cacna2d4Q5RJF7 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cacna2d4Q5RJF7 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cacna2d4Q5RJF7 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Cacna2d4Q5RJF7 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cacna2d4Q5RJF7 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC17.31■□□□□ 0.36
Cacna2d4Q5RJF7 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cacna2d4Q5RJF7 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cacna2d4Q5RJF7 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cacna2d4Q5RJF7 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cacna2d4Q5RJF7 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cacna2d4Q5RJF7 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cacna2d4Q5RJF7 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Cacna2d4Q5RJF7 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Cacna2d4Q5RJF7 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cacna2d4Q5RJF7 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Cacna2d4Q5RJF7 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cacna2d4Q5RJF7 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
Cacna2d4Q5RJF7 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cacna2d4Q5RJF7 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC17.31■□□□□ 0.36
Cacna2d4Q5RJF7 Gm11452-201ENSMUST00000122376 690 ntBASIC17.31■□□□□ 0.36
Cacna2d4Q5RJF7 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cacna2d4Q5RJF7 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC17.31■□□□□ 0.36
Cacna2d4Q5RJF7 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cacna2d4Q5RJF7 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cacna2d4Q5RJF7 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cacna2d4Q5RJF7 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms