Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-1Q5R1I8 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Trav3-1Q5R1I8 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-1Q5R1I8 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-1Q5R1I8 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Trav3-1Q5R1I8 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Trav3-1Q5R1I8 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-1Q5R1I8 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-1Q5R1I8 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-1Q5R1I8 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-1Q5R1I8 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-1Q5R1I8 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-1Q5R1I8 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-1Q5R1I8 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-1Q5R1I8 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-1Q5R1I8 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-1Q5R1I8 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.72
Trav3-1Q5R1I8 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-1Q5R1I8 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Trav3-1Q5R1I8 Gm44241-201ENSMUST00000203230 1662 ntBASIC10.53□□□□□ -0.72
Trav3-1Q5R1I8 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-1Q5R1I8 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-1Q5R1I8 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-1Q5R1I8 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-1Q5R1I8 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-1Q5R1I8 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-1Q5R1I8 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC10.53□□□□□ -0.72
Trav3-1Q5R1I8 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-1Q5R1I8 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-1Q5R1I8 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-1Q5R1I8 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-1Q5R1I8 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-1Q5R1I8 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-1Q5R1I8 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-1Q5R1I8 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Trav3-1Q5R1I8 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-1Q5R1I8 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-1Q5R1I8 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-1Q5R1I8 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-1Q5R1I8 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC10.53□□□□□ -0.72
Trav3-1Q5R1I8 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Trav3-1Q5R1I8 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-1Q5R1I8 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC10.53□□□□□ -0.72
Trav3-1Q5R1I8 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-1Q5R1I8 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-1Q5R1I8 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Trav3-1Q5R1I8 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-1Q5R1I8 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-1Q5R1I8 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-1Q5R1I8 Gm42769-201ENSMUST00000198576 1659 ntBASIC10.53□□□□□ -0.72
Trav3-1Q5R1I8 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-1Q5R1I8 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-1Q5R1I8 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-1Q5R1I8 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-1Q5R1I8 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC10.53□□□□□ -0.72
Trav3-1Q5R1I8 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-1Q5R1I8 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-1Q5R1I8 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC10.53□□□□□ -0.72
Trav3-1Q5R1I8 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-1Q5R1I8 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-1Q5R1I8 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Trav3-1Q5R1I8 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trav3-1Q5R1I8 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Trav3-1Q5R1I8 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trav3-1Q5R1I8 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC10.52□□□□□ -0.72
Trav3-1Q5R1I8 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC10.52□□□□□ -0.72
Trav3-1Q5R1I8 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trav3-1Q5R1I8 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3-1Q5R1I8 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3-1Q5R1I8 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3-1Q5R1I8 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3-1Q5R1I8 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3-1Q5R1I8 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3-1Q5R1I8 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC10.52□□□□□ -0.73
Trav3-1Q5R1I8 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3-1Q5R1I8 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3-1Q5R1I8 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Trav3-1Q5R1I8 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3-1Q5R1I8 Gm45053-201ENSMUST00000206112 2499 ntBASIC10.52□□□□□ -0.73
Trav3-1Q5R1I8 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3-1Q5R1I8 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3-1Q5R1I8 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3-1Q5R1I8 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3-1Q5R1I8 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3-1Q5R1I8 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
Trav3-1Q5R1I8 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Trav3-1Q5R1I8 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3-1Q5R1I8 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC10.52□□□□□ -0.73
Trav3-1Q5R1I8 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3-1Q5R1I8 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Trav3-1Q5R1I8 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3-1Q5R1I8 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3-1Q5R1I8 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-1Q5R1I8 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-1Q5R1I8 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-1Q5R1I8 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-1Q5R1I8 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-1Q5R1I8 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Trav3-1Q5R1I8 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-1Q5R1I8 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms