Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6d-4Q5R1I0 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6d-4Q5R1I0 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav6d-4Q5R1I0 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6d-4Q5R1I0 Gm7669-201ENSMUST00000210184 1603 ntBASIC13.06□□□□□ -0.32
Trav6d-4Q5R1I0 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Trav6d-4Q5R1I0 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trav6d-4Q5R1I0 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6d-4Q5R1I0 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6d-4Q5R1I0 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6d-4Q5R1I0 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6d-4Q5R1I0 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6d-4Q5R1I0 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Trav6d-4Q5R1I0 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6d-4Q5R1I0 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav6d-4Q5R1I0 Gm43935-201ENSMUST00000203569 1050 ntBASIC13.06□□□□□ -0.32
Trav6d-4Q5R1I0 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6d-4Q5R1I0 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav6d-4Q5R1I0 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6d-4Q5R1I0 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6d-4Q5R1I0 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Trav6d-4Q5R1I0 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.06□□□□□ -0.32
Trav6d-4Q5R1I0 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav6d-4Q5R1I0 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6d-4Q5R1I0 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6d-4Q5R1I0 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6d-4Q5R1I0 Gm42473-201ENSMUST00000201056 2291 ntBASIC13.06□□□□□ -0.32
Trav6d-4Q5R1I0 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6d-4Q5R1I0 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6d-4Q5R1I0 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trav6d-4Q5R1I0 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trav6d-4Q5R1I0 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6d-4Q5R1I0 Gm43548-201ENSMUST00000197139 2353 ntBASIC13.06□□□□□ -0.32
Trav6d-4Q5R1I0 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6d-4Q5R1I0 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6d-4Q5R1I0 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6d-4Q5R1I0 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6d-4Q5R1I0 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6d-4Q5R1I0 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6d-4Q5R1I0 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trav6d-4Q5R1I0 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6d-4Q5R1I0 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6d-4Q5R1I0 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6d-4Q5R1I0 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trav6d-4Q5R1I0 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6d-4Q5R1I0 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav6d-4Q5R1I0 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.05□□□□□ -0.32
Trav6d-4Q5R1I0 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.05□□□□□ -0.32
Trav6d-4Q5R1I0 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav6d-4Q5R1I0 Gm45167-201ENSMUST00000208007 322 ntBASIC13.05□□□□□ -0.32
Trav6d-4Q5R1I0 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Trav6d-4Q5R1I0 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6d-4Q5R1I0 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Trav6d-4Q5R1I0 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6d-4Q5R1I0 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6d-4Q5R1I0 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6d-4Q5R1I0 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6d-4Q5R1I0 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6d-4Q5R1I0 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Trav6d-4Q5R1I0 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6d-4Q5R1I0 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6d-4Q5R1I0 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6d-4Q5R1I0 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6d-4Q5R1I0 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6d-4Q5R1I0 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trav6d-4Q5R1I0 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6d-4Q5R1I0 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6d-4Q5R1I0 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6d-4Q5R1I0 Prkcz2-201ENSMUST00000206136 1756 ntBASIC13.04□□□□□ -0.32
Trav6d-4Q5R1I0 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6d-4Q5R1I0 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6d-4Q5R1I0 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6d-4Q5R1I0 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6d-4Q5R1I0 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6d-4Q5R1I0 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6d-4Q5R1I0 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6d-4Q5R1I0 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6d-4Q5R1I0 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trav6d-4Q5R1I0 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6d-4Q5R1I0 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trav6d-4Q5R1I0 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6d-4Q5R1I0 Gm14140-201ENSMUST00000119999 995 ntBASIC13.04□□□□□ -0.32
Trav6d-4Q5R1I0 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6d-4Q5R1I0 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6d-4Q5R1I0 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav6d-4Q5R1I0 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav6d-4Q5R1I0 Gm5253-201ENSMUST00000187104 1025 ntBASIC13.04□□□□□ -0.32
Trav6d-4Q5R1I0 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.04□□□□□ -0.32
Trav6d-4Q5R1I0 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC13.04□□□□□ -0.32
Trav6d-4Q5R1I0 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC13.04□□□□□ -0.32
Trav6d-4Q5R1I0 Gm7787-201ENSMUST00000216858 688 ntBASIC13.04□□□□□ -0.32
Trav6d-4Q5R1I0 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav6d-4Q5R1I0 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.04□□□□□ -0.32
Trav6d-4Q5R1I0 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6d-4Q5R1I0 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6d-4Q5R1I0 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6d-4Q5R1I0 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC13.04□□□□□ -0.32
Trav6d-4Q5R1I0 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6d-4Q5R1I0 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6d-4Q5R1I0 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms