Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav7d-4Q5R1H9 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav7d-4Q5R1H9 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav7d-4Q5R1H9 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav7d-4Q5R1H9 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav7d-4Q5R1H9 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav7d-4Q5R1H9 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav7d-4Q5R1H9 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Trav7d-4Q5R1H9 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav7d-4Q5R1H9 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav7d-4Q5R1H9 AC159649.2-201ENSMUST00000222984 3223 ntBASIC11.9□□□□□ -0.5
Trav7d-4Q5R1H9 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav7d-4Q5R1H9 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Trav7d-4Q5R1H9 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav7d-4Q5R1H9 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav7d-4Q5R1H9 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav7d-4Q5R1H9 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav7d-4Q5R1H9 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav7d-4Q5R1H9 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC11.9□□□□□ -0.5
Trav7d-4Q5R1H9 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav7d-4Q5R1H9 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC11.9□□□□□ -0.5
Trav7d-4Q5R1H9 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav7d-4Q5R1H9 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav7d-4Q5R1H9 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav7d-4Q5R1H9 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav7d-4Q5R1H9 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC11.9□□□□□ -0.5
Trav7d-4Q5R1H9 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav7d-4Q5R1H9 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC11.9□□□□□ -0.5
Trav7d-4Q5R1H9 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC11.9□□□□□ -0.5
Trav7d-4Q5R1H9 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav7d-4Q5R1H9 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC11.9□□□□□ -0.5
Trav7d-4Q5R1H9 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav7d-4Q5R1H9 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav7d-4Q5R1H9 Gm43183-201ENSMUST00000200632 547 ntBASIC11.9□□□□□ -0.5
Trav7d-4Q5R1H9 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC11.9□□□□□ -0.5
Trav7d-4Q5R1H9 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav7d-4Q5R1H9 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav7d-4Q5R1H9 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav7d-4Q5R1H9 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC11.9□□□□□ -0.5
Trav7d-4Q5R1H9 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Trav7d-4Q5R1H9 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav7d-4Q5R1H9 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav7d-4Q5R1H9 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav7d-4Q5R1H9 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav7d-4Q5R1H9 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav7d-4Q5R1H9 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav7d-4Q5R1H9 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav7d-4Q5R1H9 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC11.9□□□□□ -0.5
Trav7d-4Q5R1H9 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav7d-4Q5R1H9 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Trav7d-4Q5R1H9 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav7d-4Q5R1H9 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav7d-4Q5R1H9 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav7d-4Q5R1H9 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Trav7d-4Q5R1H9 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav7d-4Q5R1H9 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav7d-4Q5R1H9 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav7d-4Q5R1H9 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trav7d-4Q5R1H9 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav7d-4Q5R1H9 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav7d-4Q5R1H9 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav7d-4Q5R1H9 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav7d-4Q5R1H9 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav7d-4Q5R1H9 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav7d-4Q5R1H9 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav7d-4Q5R1H9 Gm43399-201ENSMUST00000202546 2374 ntBASIC11.89□□□□□ -0.51
Trav7d-4Q5R1H9 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trav7d-4Q5R1H9 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav7d-4Q5R1H9 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC11.89□□□□□ -0.51
Trav7d-4Q5R1H9 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trav7d-4Q5R1H9 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trav7d-4Q5R1H9 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trav7d-4Q5R1H9 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav7d-4Q5R1H9 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav7d-4Q5R1H9 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav7d-4Q5R1H9 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Trav7d-4Q5R1H9 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav7d-4Q5R1H9 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav7d-4Q5R1H9 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav7d-4Q5R1H9 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trav7d-4Q5R1H9 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav7d-4Q5R1H9 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav7d-4Q5R1H9 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav7d-4Q5R1H9 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7d-4Q5R1H9 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7d-4Q5R1H9 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav7d-4Q5R1H9 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7d-4Q5R1H9 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7d-4Q5R1H9 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7d-4Q5R1H9 Camk2g-217ENSMUST00000226630 1937 ntBASIC11.88□□□□□ -0.51
Trav7d-4Q5R1H9 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7d-4Q5R1H9 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Trav7d-4Q5R1H9 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7d-4Q5R1H9 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7d-4Q5R1H9 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav7d-4Q5R1H9 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7d-4Q5R1H9 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC11.88□□□□□ -0.51
Trav7d-4Q5R1H9 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC11.88□□□□□ -0.51
Trav7d-4Q5R1H9 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav7d-4Q5R1H9 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms