Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav8d-1Q5R1H8 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav8d-1Q5R1H8 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav8d-1Q5R1H8 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav8d-1Q5R1H8 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav8d-1Q5R1H8 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trav8d-1Q5R1H8 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav8d-1Q5R1H8 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Trav8d-1Q5R1H8 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav8d-1Q5R1H8 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav8d-1Q5R1H8 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trav8d-1Q5R1H8 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav8d-1Q5R1H8 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav8d-1Q5R1H8 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.79□□□□□ -0.36
Trav8d-1Q5R1H8 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav8d-1Q5R1H8 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav8d-1Q5R1H8 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav8d-1Q5R1H8 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav8d-1Q5R1H8 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav8d-1Q5R1H8 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav8d-1Q5R1H8 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav8d-1Q5R1H8 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav8d-1Q5R1H8 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav8d-1Q5R1H8 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav8d-1Q5R1H8 Gm4217-201ENSMUST00000182243 1002 ntBASIC12.79□□□□□ -0.36
Trav8d-1Q5R1H8 Gm7213-201ENSMUST00000215977 950 ntBASIC12.79□□□□□ -0.36
Trav8d-1Q5R1H8 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav8d-1Q5R1H8 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav8d-1Q5R1H8 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav8d-1Q5R1H8 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav8d-1Q5R1H8 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC12.79□□□□□ -0.36
Trav8d-1Q5R1H8 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav8d-1Q5R1H8 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav8d-1Q5R1H8 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav8d-1Q5R1H8 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav8d-1Q5R1H8 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trav8d-1Q5R1H8 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trav8d-1Q5R1H8 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav8d-1Q5R1H8 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav8d-1Q5R1H8 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trav8d-1Q5R1H8 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav8d-1Q5R1H8 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav8d-1Q5R1H8 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav8d-1Q5R1H8 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav8d-1Q5R1H8 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav8d-1Q5R1H8 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Trav8d-1Q5R1H8 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav8d-1Q5R1H8 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav8d-1Q5R1H8 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trav8d-1Q5R1H8 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav8d-1Q5R1H8 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Trav8d-1Q5R1H8 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav8d-1Q5R1H8 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav8d-1Q5R1H8 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav8d-1Q5R1H8 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav8d-1Q5R1H8 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trav8d-1Q5R1H8 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trav8d-1Q5R1H8 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav8d-1Q5R1H8 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav8d-1Q5R1H8 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav8d-1Q5R1H8 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav8d-1Q5R1H8 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav8d-1Q5R1H8 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav8d-1Q5R1H8 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav8d-1Q5R1H8 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav8d-1Q5R1H8 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav8d-1Q5R1H8 Tfap2a-203ENSMUST00000223869 2037 ntBASIC12.78□□□□□ -0.36
Trav8d-1Q5R1H8 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav8d-1Q5R1H8 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trav8d-1Q5R1H8 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav8d-1Q5R1H8 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trav8d-1Q5R1H8 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav8d-1Q5R1H8 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav8d-1Q5R1H8 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav8d-1Q5R1H8 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav8d-1Q5R1H8 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
Trav8d-1Q5R1H8 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav8d-1Q5R1H8 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.77□□□□□ -0.36
Trav8d-1Q5R1H8 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav8d-1Q5R1H8 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav8d-1Q5R1H8 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Trav8d-1Q5R1H8 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav8d-1Q5R1H8 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav8d-1Q5R1H8 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav8d-1Q5R1H8 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav8d-1Q5R1H8 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav8d-1Q5R1H8 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC12.77□□□□□ -0.37
Trav8d-1Q5R1H8 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC12.77□□□□□ -0.37
Trav8d-1Q5R1H8 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC12.77□□□□□ -0.37
Trav8d-1Q5R1H8 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav8d-1Q5R1H8 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav8d-1Q5R1H8 Gm7370-201ENSMUST00000219471 767 ntBASIC12.77□□□□□ -0.37
Trav8d-1Q5R1H8 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Trav8d-1Q5R1H8 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav8d-1Q5R1H8 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav8d-1Q5R1H8 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trav8d-1Q5R1H8 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trav8d-1Q5R1H8 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Trav8d-1Q5R1H8 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav8d-1Q5R1H8 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms