Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Trav5d-4Q5R1F6 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav5d-4Q5R1F6 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Trav5d-4Q5R1F6 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav5d-4Q5R1F6 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav5d-4Q5R1F6 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav5d-4Q5R1F6 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav5d-4Q5R1F6 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav5d-4Q5R1F6 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.41□□□□□ -0.26
Trav5d-4Q5R1F6 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav5d-4Q5R1F6 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav5d-4Q5R1F6 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav5d-4Q5R1F6 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC13.41□□□□□ -0.26
Trav5d-4Q5R1F6 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav5d-4Q5R1F6 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav5d-4Q5R1F6 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav5d-4Q5R1F6 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav5d-4Q5R1F6 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC13.41□□□□□ -0.26
Trav5d-4Q5R1F6 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav5d-4Q5R1F6 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav5d-4Q5R1F6 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav5d-4Q5R1F6 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav5d-4Q5R1F6 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav5d-4Q5R1F6 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav5d-4Q5R1F6 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC13.41□□□□□ -0.26
Trav5d-4Q5R1F6 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav5d-4Q5R1F6 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav5d-4Q5R1F6 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.41□□□□□ -0.26
Trav5d-4Q5R1F6 Gm27528-202ENSMUST00000222916 2012 ntBASIC13.4□□□□□ -0.26
Trav5d-4Q5R1F6 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav5d-4Q5R1F6 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Trav5d-4Q5R1F6 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav5d-4Q5R1F6 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav5d-4Q5R1F6 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Trav5d-4Q5R1F6 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav5d-4Q5R1F6 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav5d-4Q5R1F6 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC13.4□□□□□ -0.26
Trav5d-4Q5R1F6 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Trav5d-4Q5R1F6 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
Trav5d-4Q5R1F6 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC13.4□□□□□ -0.26
Trav5d-4Q5R1F6 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC13.4□□□□□ -0.26
Trav5d-4Q5R1F6 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC13.4□□□□□ -0.26
Trav5d-4Q5R1F6 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC13.4□□□□□ -0.26
Trav5d-4Q5R1F6 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav5d-4Q5R1F6 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav5d-4Q5R1F6 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav5d-4Q5R1F6 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav5d-4Q5R1F6 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trav5d-4Q5R1F6 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav5d-4Q5R1F6 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav5d-4Q5R1F6 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav5d-4Q5R1F6 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav5d-4Q5R1F6 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Trav5d-4Q5R1F6 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Trav5d-4Q5R1F6 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Trav5d-4Q5R1F6 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Trav5d-4Q5R1F6 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5d-4Q5R1F6 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5d-4Q5R1F6 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5d-4Q5R1F6 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav5d-4Q5R1F6 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5d-4Q5R1F6 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5d-4Q5R1F6 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5d-4Q5R1F6 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trav5d-4Q5R1F6 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5d-4Q5R1F6 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5d-4Q5R1F6 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav5d-4Q5R1F6 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5d-4Q5R1F6 Gm15165-201ENSMUST00000118140 502 ntBASIC13.39□□□□□ -0.27
Trav5d-4Q5R1F6 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5d-4Q5R1F6 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav5d-4Q5R1F6 Gm27867-201ENSMUST00000184778 125 ntBASIC13.39□□□□□ -0.27
Trav5d-4Q5R1F6 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5d-4Q5R1F6 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5d-4Q5R1F6 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5d-4Q5R1F6 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5d-4Q5R1F6 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav5d-4Q5R1F6 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5d-4Q5R1F6 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5d-4Q5R1F6 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trav5d-4Q5R1F6 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5d-4Q5R1F6 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5d-4Q5R1F6 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5d-4Q5R1F6 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trav5d-4Q5R1F6 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5d-4Q5R1F6 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5d-4Q5R1F6 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5d-4Q5R1F6 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5d-4Q5R1F6 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5d-4Q5R1F6 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav5d-4Q5R1F6 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav5d-4Q5R1F6 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav5d-4Q5R1F6 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav5d-4Q5R1F6 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav5d-4Q5R1F6 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav5d-4Q5R1F6 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav5d-4Q5R1F6 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav5d-4Q5R1F6 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav5d-4Q5R1F6 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav5d-4Q5R1F6 Gm4609-201ENSMUST00000106443 1002 ntBASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms