Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC12.14□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Gm16061-201ENSMUST00000122167 857 ntBASIC12.14□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC12.14□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Gm21814-202ENSMUST00000203277 873 ntBASIC12.14□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.13□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.13□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC12.12□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.12□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC12.12□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Gm715-201ENSMUST00000117865 831 ntBASIC12.12□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC12.12□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Gm6257-201ENSMUST00000163864 910 ntBASIC12.12□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC12.12□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Gm29994-201ENSMUST00000195495 1193 ntBASIC12.12□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Gm7213-201ENSMUST00000215977 950 ntBASIC12.12□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.12□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav15-1-dv6-1Q5R1D2 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms