Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Shank3Q4ACU6 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Shank3Q4ACU6 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Shank3Q4ACU6 Syt7-204ENSMUST00000223586 1344 ntBASIC19.15■□□□□ 0.66
Shank3Q4ACU6 Gm43072-201ENSMUST00000200283 1671 ntBASIC19.15■□□□□ 0.66
Shank3Q4ACU6 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Shank3Q4ACU6 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Shank3Q4ACU6 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Shank3Q4ACU6 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Shank3Q4ACU6 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Shank3Q4ACU6 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Shank3Q4ACU6 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Shank3Q4ACU6 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Shank3Q4ACU6 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Shank3Q4ACU6 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Shank3Q4ACU6 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Shank3Q4ACU6 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Shank3Q4ACU6 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.15■□□□□ 0.66
Shank3Q4ACU6 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Shank3Q4ACU6 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Shank3Q4ACU6 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Shank3Q4ACU6 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Shank3Q4ACU6 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Shank3Q4ACU6 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Shank3Q4ACU6 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Shank3Q4ACU6 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC19.14■□□□□ 0.66
Shank3Q4ACU6 AC164567.1-201ENSMUST00000219185 960 ntBASIC19.14■□□□□ 0.66
Shank3Q4ACU6 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Shank3Q4ACU6 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Shank3Q4ACU6 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Shank3Q4ACU6 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Shank3Q4ACU6 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Shank3Q4ACU6 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Shank3Q4ACU6 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Shank3Q4ACU6 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Shank3Q4ACU6 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Shank3Q4ACU6 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Shank3Q4ACU6 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Shank3Q4ACU6 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Shank3Q4ACU6 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Shank3Q4ACU6 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC19.13■□□□□ 0.65
Shank3Q4ACU6 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC19.13■□□□□ 0.65
Shank3Q4ACU6 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC19.13■□□□□ 0.65
Shank3Q4ACU6 Cdk7-205ENSMUST00000225990 1159 ntBASIC19.13■□□□□ 0.65
Shank3Q4ACU6 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Shank3Q4ACU6 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Shank3Q4ACU6 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Shank3Q4ACU6 AC131743.5-201ENSMUST00000220775 1618 ntBASIC19.13■□□□□ 0.65
Shank3Q4ACU6 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Shank3Q4ACU6 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Shank3Q4ACU6 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Shank3Q4ACU6 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Shank3Q4ACU6 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Shank3Q4ACU6 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Shank3Q4ACU6 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC19.12■□□□□ 0.65
Shank3Q4ACU6 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Shank3Q4ACU6 AL593843.1-201ENSMUST00000195891 145 ntBASIC19.12■□□□□ 0.65
Shank3Q4ACU6 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Shank3Q4ACU6 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Shank3Q4ACU6 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Shank3Q4ACU6 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC19.12■□□□□ 0.65
Shank3Q4ACU6 Gm15222-202ENSMUST00000228667 1726 ntBASIC19.12■□□□□ 0.65
Shank3Q4ACU6 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Shank3Q4ACU6 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Shank3Q4ACU6 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Shank3Q4ACU6 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Shank3Q4ACU6 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
Shank3Q4ACU6 Gm6263-201ENSMUST00000120029 1342 ntBASIC19.12■□□□□ 0.65
Shank3Q4ACU6 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Shank3Q4ACU6 Gm42473-201ENSMUST00000201056 2291 ntBASIC19.12■□□□□ 0.65
Shank3Q4ACU6 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Shank3Q4ACU6 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Shank3Q4ACU6 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
Shank3Q4ACU6 Gm9719-201ENSMUST00000162765 543 ntBASIC19.11■□□□□ 0.65
Shank3Q4ACU6 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Shank3Q4ACU6 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Shank3Q4ACU6 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Shank3Q4ACU6 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Shank3Q4ACU6 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Shank3Q4ACU6 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Shank3Q4ACU6 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
Shank3Q4ACU6 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Shank3Q4ACU6 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Shank3Q4ACU6 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC19.11■□□□□ 0.65
Shank3Q4ACU6 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Shank3Q4ACU6 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Shank3Q4ACU6 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC19.11■□□□□ 0.65
Shank3Q4ACU6 Gm12138-201ENSMUST00000122180 951 ntBASIC19.11■□□□□ 0.65
Shank3Q4ACU6 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Shank3Q4ACU6 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
Shank3Q4ACU6 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
Shank3Q4ACU6 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Shank3Q4ACU6 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC19.11■□□□□ 0.65
Shank3Q4ACU6 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC19.11■□□□□ 0.65
Shank3Q4ACU6 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Shank3Q4ACU6 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Shank3Q4ACU6 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Shank3Q4ACU6 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Shank3Q4ACU6 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Shank3Q4ACU6 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms