Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
Arhgef40Q3UPH7 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Arhgef40Q3UPH7 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC22.67■■□□□ 1.22
Arhgef40Q3UPH7 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC22.67■■□□□ 1.22
Arhgef40Q3UPH7 Gm8597-201ENSMUST00000191525 1109 ntBASIC22.67■■□□□ 1.22
Arhgef40Q3UPH7 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Arhgef40Q3UPH7 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Arhgef40Q3UPH7 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC22.67■■□□□ 1.22
Arhgef40Q3UPH7 AC159621.2-201ENSMUST00000223519 1326 ntBASIC22.67■■□□□ 1.22
Arhgef40Q3UPH7 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Arhgef40Q3UPH7 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC22.67■■□□□ 1.22
Arhgef40Q3UPH7 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Arhgef40Q3UPH7 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Arhgef40Q3UPH7 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Arhgef40Q3UPH7 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Arhgef40Q3UPH7 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Arhgef40Q3UPH7 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC22.67■■□□□ 1.22
Arhgef40Q3UPH7 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Arhgef40Q3UPH7 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC22.67■■□□□ 1.22
Arhgef40Q3UPH7 Gm7556-201ENSMUST00000201178 1084 ntBASIC22.67■■□□□ 1.22
Arhgef40Q3UPH7 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Arhgef40Q3UPH7 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Arhgef40Q3UPH7 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
Arhgef40Q3UPH7 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Arhgef40Q3UPH7 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Arhgef40Q3UPH7 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Arhgef40Q3UPH7 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Arhgef40Q3UPH7 Gtpbp10-211ENSMUST00000198799 648 ntBASIC22.66■■□□□ 1.22
Arhgef40Q3UPH7 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC22.66■■□□□ 1.22
Arhgef40Q3UPH7 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Arhgef40Q3UPH7 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Arhgef40Q3UPH7 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Arhgef40Q3UPH7 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Arhgef40Q3UPH7 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
Arhgef40Q3UPH7 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Arhgef40Q3UPH7 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC22.65■■□□□ 1.22
Arhgef40Q3UPH7 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Arhgef40Q3UPH7 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Arhgef40Q3UPH7 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Arhgef40Q3UPH7 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Arhgef40Q3UPH7 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Arhgef40Q3UPH7 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Arhgef40Q3UPH7 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Arhgef40Q3UPH7 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
Arhgef40Q3UPH7 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Arhgef40Q3UPH7 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Arhgef40Q3UPH7 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Arhgef40Q3UPH7 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.22
Arhgef40Q3UPH7 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC22.64■■□□□ 1.21
Arhgef40Q3UPH7 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Arhgef40Q3UPH7 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC22.64■■□□□ 1.21
Arhgef40Q3UPH7 Gm27920-201ENSMUST00000183953 96 ntBASIC22.64■■□□□ 1.21
Arhgef40Q3UPH7 Gm28630-201ENSMUST00000187806 498 ntBASIC22.64■■□□□ 1.21
Arhgef40Q3UPH7 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC22.64■■□□□ 1.21
Arhgef40Q3UPH7 Klk2-ps-201ENSMUST00000205342 571 ntBASIC22.64■■□□□ 1.21
Arhgef40Q3UPH7 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Arhgef40Q3UPH7 AC153526.5-201ENSMUST00000218661 2147 ntBASIC22.64■■□□□ 1.21
Arhgef40Q3UPH7 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC22.64■■□□□ 1.21
Arhgef40Q3UPH7 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Arhgef40Q3UPH7 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Arhgef40Q3UPH7 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Arhgef40Q3UPH7 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC22.64■■□□□ 1.21
Arhgef40Q3UPH7 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Arhgef40Q3UPH7 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Arhgef40Q3UPH7 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Arhgef40Q3UPH7 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC22.63■■□□□ 1.21
Arhgef40Q3UPH7 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Arhgef40Q3UPH7 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC22.63■■□□□ 1.21
Arhgef40Q3UPH7 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Arhgef40Q3UPH7 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Arhgef40Q3UPH7 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Arhgef40Q3UPH7 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC22.63■■□□□ 1.21
Arhgef40Q3UPH7 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Arhgef40Q3UPH7 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Arhgef40Q3UPH7 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Arhgef40Q3UPH7 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Arhgef40Q3UPH7 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Arhgef40Q3UPH7 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
Arhgef40Q3UPH7 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Arhgef40Q3UPH7 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
Arhgef40Q3UPH7 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
Arhgef40Q3UPH7 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Arhgef40Q3UPH7 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Arhgef40Q3UPH7 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Arhgef40Q3UPH7 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Arhgef40Q3UPH7 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Arhgef40Q3UPH7 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Arhgef40Q3UPH7 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Arhgef40Q3UPH7 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Arhgef40Q3UPH7 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC22.62■■□□□ 1.21
Arhgef40Q3UPH7 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Arhgef40Q3UPH7 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Arhgef40Q3UPH7 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Arhgef40Q3UPH7 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
Arhgef40Q3UPH7 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC22.62■■□□□ 1.21
Arhgef40Q3UPH7 Gm27306-201ENSMUST00000183970 107 ntBASIC22.62■■□□□ 1.21
Arhgef40Q3UPH7 Gm27430-201ENSMUST00000184585 107 ntBASIC22.62■■□□□ 1.21
Arhgef40Q3UPH7 Gm44333-201ENSMUST00000197168 107 ntBASIC22.62■■□□□ 1.21
Arhgef40Q3UPH7 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Arhgef40Q3UPH7 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms