Protein–RNA interactions for Protein: Q3U2A8

Vars2, Valine--tRNA ligase, mitochondrial, mousemouse

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vars2Q3U2A8 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vars2Q3U2A8 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Vars2Q3U2A8 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vars2Q3U2A8 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vars2Q3U2A8 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vars2Q3U2A8 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vars2Q3U2A8 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vars2Q3U2A8 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Vars2Q3U2A8 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC19.19■□□□□ 0.66
Vars2Q3U2A8 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vars2Q3U2A8 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
Vars2Q3U2A8 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vars2Q3U2A8 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vars2Q3U2A8 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vars2Q3U2A8 Gm13337-201ENSMUST00000119183 1594 ntBASIC19.19■□□□□ 0.66
Vars2Q3U2A8 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Vars2Q3U2A8 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vars2Q3U2A8 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vars2Q3U2A8 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
Vars2Q3U2A8 Gm7669-201ENSMUST00000210184 1603 ntBASIC19.18■□□□□ 0.66
Vars2Q3U2A8 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vars2Q3U2A8 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vars2Q3U2A8 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Vars2Q3U2A8 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Vars2Q3U2A8 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Vars2Q3U2A8 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vars2Q3U2A8 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vars2Q3U2A8 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vars2Q3U2A8 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
Vars2Q3U2A8 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Vars2Q3U2A8 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC19.18■□□□□ 0.66
Vars2Q3U2A8 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC19.18■□□□□ 0.66
Vars2Q3U2A8 Gm17150-201ENSMUST00000165577 381 ntBASIC19.18■□□□□ 0.66
Vars2Q3U2A8 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Vars2Q3U2A8 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vars2Q3U2A8 Gm20445-201ENSMUST00000061905 565 ntBASIC19.18■□□□□ 0.66
Vars2Q3U2A8 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Vars2Q3U2A8 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vars2Q3U2A8 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vars2Q3U2A8 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vars2Q3U2A8 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Vars2Q3U2A8 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vars2Q3U2A8 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vars2Q3U2A8 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Vars2Q3U2A8 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vars2Q3U2A8 Ldb3-207ENSMUST00000227819 1499 ntBASIC19.17■□□□□ 0.66
Vars2Q3U2A8 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
Vars2Q3U2A8 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vars2Q3U2A8 Gm5566-201ENSMUST00000116118 459 ntBASIC19.17■□□□□ 0.66
Vars2Q3U2A8 Gm4875-201ENSMUST00000118257 786 ntBASIC19.17■□□□□ 0.66
Vars2Q3U2A8 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Vars2Q3U2A8 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Vars2Q3U2A8 Cd63-ps-201ENSMUST00000145417 875 ntBASIC19.17■□□□□ 0.66
Vars2Q3U2A8 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Vars2Q3U2A8 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC19.17■□□□□ 0.66
Vars2Q3U2A8 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
Vars2Q3U2A8 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC19.17■□□□□ 0.66
Vars2Q3U2A8 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC19.17■□□□□ 0.66
Vars2Q3U2A8 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vars2Q3U2A8 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vars2Q3U2A8 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vars2Q3U2A8 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vars2Q3U2A8 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vars2Q3U2A8 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vars2Q3U2A8 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vars2Q3U2A8 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vars2Q3U2A8 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vars2Q3U2A8 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vars2Q3U2A8 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC19.16■□□□□ 0.66
Vars2Q3U2A8 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC19.16■□□□□ 0.66
Vars2Q3U2A8 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Vars2Q3U2A8 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
Vars2Q3U2A8 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
Vars2Q3U2A8 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Vars2Q3U2A8 Gm9719-201ENSMUST00000162765 543 ntBASIC19.16■□□□□ 0.66
Vars2Q3U2A8 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC19.16■□□□□ 0.66
Vars2Q3U2A8 AY702102-202ENSMUST00000194651 1173 ntBASIC19.16■□□□□ 0.66
Vars2Q3U2A8 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Vars2Q3U2A8 Klk2-ps-201ENSMUST00000205342 571 ntBASIC19.16■□□□□ 0.66
Vars2Q3U2A8 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vars2Q3U2A8 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Vars2Q3U2A8 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vars2Q3U2A8 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vars2Q3U2A8 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Vars2Q3U2A8 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vars2Q3U2A8 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Vars2Q3U2A8 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC19.16■□□□□ 0.66
Vars2Q3U2A8 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC19.16■□□□□ 0.66
Vars2Q3U2A8 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vars2Q3U2A8 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vars2Q3U2A8 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Vars2Q3U2A8 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Vars2Q3U2A8 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Vars2Q3U2A8 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vars2Q3U2A8 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Vars2Q3U2A8 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vars2Q3U2A8 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vars2Q3U2A8 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vars2Q3U2A8 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.15■□□□□ 0.66
Vars2Q3U2A8 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms