Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.36■□□□□ 0.21
Cul4aQ3TCH7 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.36■□□□□ 0.21
Cul4aQ3TCH7 Gm25016-201ENSMUST00000158399 131 ntBASIC16.36■□□□□ 0.21
Cul4aQ3TCH7 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.36■□□□□ 0.21
Cul4aQ3TCH7 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.36■□□□□ 0.21
Cul4aQ3TCH7 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.36■□□□□ 0.21
Cul4aQ3TCH7 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.36■□□□□ 0.21
Cul4aQ3TCH7 Gm8825-201ENSMUST00000182565 998 ntBASIC16.36■□□□□ 0.21
Cul4aQ3TCH7 Gm4518-201ENSMUST00000182638 718 ntBASIC16.36■□□□□ 0.21
Cul4aQ3TCH7 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.36■□□□□ 0.21
Cul4aQ3TCH7 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.36■□□□□ 0.21
Cul4aQ3TCH7 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.36■□□□□ 0.21
Cul4aQ3TCH7 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.36■□□□□ 0.21
Cul4aQ3TCH7 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.36■□□□□ 0.21
Cul4aQ3TCH7 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cul4aQ3TCH7 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cul4aQ3TCH7 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cul4aQ3TCH7 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cul4aQ3TCH7 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cul4aQ3TCH7 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cul4aQ3TCH7 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cul4aQ3TCH7 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Cul4aQ3TCH7 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cul4aQ3TCH7 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cul4aQ3TCH7 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Cul4aQ3TCH7 Gm5049-201ENSMUST00000195878 1590 ntBASIC16.35■□□□□ 0.21
Cul4aQ3TCH7 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cul4aQ3TCH7 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cul4aQ3TCH7 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Cul4aQ3TCH7 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cul4aQ3TCH7 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cul4aQ3TCH7 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cul4aQ3TCH7 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.35■□□□□ 0.21
Cul4aQ3TCH7 Gm14722-201ENSMUST00000118943 689 ntBASIC16.35■□□□□ 0.21
Cul4aQ3TCH7 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cul4aQ3TCH7 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.35■□□□□ 0.21
Cul4aQ3TCH7 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.35■□□□□ 0.21
Cul4aQ3TCH7 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.35■□□□□ 0.21
Cul4aQ3TCH7 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cul4aQ3TCH7 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cul4aQ3TCH7 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cul4aQ3TCH7 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cul4aQ3TCH7 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cul4aQ3TCH7 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cul4aQ3TCH7 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Cul4aQ3TCH7 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cul4aQ3TCH7 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cul4aQ3TCH7 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cul4aQ3TCH7 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cul4aQ3TCH7 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cul4aQ3TCH7 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Cul4aQ3TCH7 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cul4aQ3TCH7 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Cul4aQ3TCH7 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Cul4aQ3TCH7 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cul4aQ3TCH7 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cul4aQ3TCH7 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cul4aQ3TCH7 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cul4aQ3TCH7 Mir3081-201ENSMUST00000175305 84 ntBASIC16.34■□□□□ 0.21
Cul4aQ3TCH7 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cul4aQ3TCH7 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cul4aQ3TCH7 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cul4aQ3TCH7 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.34■□□□□ 0.21
Cul4aQ3TCH7 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cul4aQ3TCH7 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cul4aQ3TCH7 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cul4aQ3TCH7 Gm9768-201ENSMUST00000206007 2861 ntBASIC16.34■□□□□ 0.21
Cul4aQ3TCH7 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cul4aQ3TCH7 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cul4aQ3TCH7 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Cul4aQ3TCH7 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cul4aQ3TCH7 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cul4aQ3TCH7 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cul4aQ3TCH7 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cul4aQ3TCH7 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cul4aQ3TCH7 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cul4aQ3TCH7 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cul4aQ3TCH7 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.2
Cul4aQ3TCH7 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cul4aQ3TCH7 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cul4aQ3TCH7 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cul4aQ3TCH7 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Cul4aQ3TCH7 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Cul4aQ3TCH7 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cul4aQ3TCH7 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cul4aQ3TCH7 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cul4aQ3TCH7 Gm9172-201ENSMUST00000212092 954 ntBASIC16.33■□□□□ 0.2
Cul4aQ3TCH7 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cul4aQ3TCH7 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Cul4aQ3TCH7 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cul4aQ3TCH7 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cul4aQ3TCH7 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cul4aQ3TCH7 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cul4aQ3TCH7 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Cul4aQ3TCH7 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Cul4aQ3TCH7 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cul4aQ3TCH7 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cul4aQ3TCH7 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.33■□□□□ 0.2
Cul4aQ3TCH7 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Cul4aQ3TCH7 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms