Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC8.18□□□□□ -1.1
Ush2AQ2QI47 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
Ush2AQ2QI47 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
Ush2AQ2QI47 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
Ush2AQ2QI47 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Ush2AQ2QI47 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Ush2AQ2QI47 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC8.17□□□□□ -1.1
Ush2AQ2QI47 Gm38266-201ENSMUST00000194931 421 ntBASIC8.17□□□□□ -1.1
Ush2AQ2QI47 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Ush2AQ2QI47 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
Ush2AQ2QI47 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Ush2AQ2QI47 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC8.17□□□□□ -1.1
Ush2AQ2QI47 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Ush2AQ2QI47 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Ush2AQ2QI47 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Ush2AQ2QI47 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Ush2AQ2QI47 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Ush2AQ2QI47 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC8.17□□□□□ -1.1
Ush2AQ2QI47 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Ush2AQ2QI47 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Ush2AQ2QI47 Gm43808-201ENSMUST00000202534 2065 ntBASIC8.17□□□□□ -1.1
Ush2AQ2QI47 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Ush2AQ2QI47 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Ush2AQ2QI47 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Ush2AQ2QI47 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Ush2AQ2QI47 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC8.17□□□□□ -1.1
Ush2AQ2QI47 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Ush2AQ2QI47 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Ush2AQ2QI47 Gm43758-201ENSMUST00000199500 367 ntBASIC8.17□□□□□ -1.1
Ush2AQ2QI47 Gm9826-201ENSMUST00000029124 1299 ntBASIC8.17□□□□□ -1.1
Ush2AQ2QI47 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Ush2AQ2QI47 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Ush2AQ2QI47 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Ush2AQ2QI47 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Ush2AQ2QI47 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC8.17□□□□□ -1.1
Ush2AQ2QI47 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Ush2AQ2QI47 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Ush2AQ2QI47 Gm45865-201ENSMUST00000211815 945 ntBASIC8.17□□□□□ -1.1
Ush2AQ2QI47 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Ush2AQ2QI47 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Ush2AQ2QI47 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Ush2AQ2QI47 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Ush2AQ2QI47 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Ush2AQ2QI47 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC8.17□□□□□ -1.1
Ush2AQ2QI47 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC8.17□□□□□ -1.1
Ush2AQ2QI47 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Ush2AQ2QI47 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC8.16□□□□□ -1.1
Ush2AQ2QI47 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ush2AQ2QI47 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Ush2AQ2QI47 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ush2AQ2QI47 Gm5363-201ENSMUST00000211927 938 ntBASIC8.16□□□□□ -1.1
Ush2AQ2QI47 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC8.16□□□□□ -1.1
Ush2AQ2QI47 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ush2AQ2QI47 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Ush2AQ2QI47 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Ush2AQ2QI47 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ush2AQ2QI47 Gm37194-201ENSMUST00000193092 3031 ntBASIC8.16□□□□□ -1.1
Ush2AQ2QI47 Gm44207-201ENSMUST00000204568 1424 ntBASIC8.16□□□□□ -1.1
Ush2AQ2QI47 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC8.16□□□□□ -1.1
Ush2AQ2QI47 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ush2AQ2QI47 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ush2AQ2QI47 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ush2AQ2QI47 Gm12384-201ENSMUST00000119228 919 ntBASIC8.16□□□□□ -1.1
Ush2AQ2QI47 Gm8463-201ENSMUST00000208573 613 ntBASIC8.16□□□□□ -1.1
Ush2AQ2QI47 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC8.16□□□□□ -1.1
Ush2AQ2QI47 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Ush2AQ2QI47 Dmtn-210ENSMUST00000228824 2377 ntBASIC8.16□□□□□ -1.1
Ush2AQ2QI47 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ush2AQ2QI47 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
Ush2AQ2QI47 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC8.16□□□□□ -1.1
Ush2AQ2QI47 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ush2AQ2QI47 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ush2AQ2QI47 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ush2AQ2QI47 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ush2AQ2QI47 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ush2AQ2QI47 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Ush2AQ2QI47 Gm13342-201ENSMUST00000121055 207 ntBASIC8.16□□□□□ -1.1
Ush2AQ2QI47 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC8.16□□□□□ -1.1
Ush2AQ2QI47 Gm7390-201ENSMUST00000212452 1216 ntBASIC8.16□□□□□ -1.1
Ush2AQ2QI47 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ush2AQ2QI47 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC8.16□□□□□ -1.1
Ush2AQ2QI47 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Ush2AQ2QI47 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ush2AQ2QI47 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ush2AQ2QI47 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ush2AQ2QI47 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ush2AQ2QI47 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ush2AQ2QI47 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ush2AQ2QI47 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC8.16□□□□□ -1.1
Ush2AQ2QI47 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ush2AQ2QI47 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ush2AQ2QI47 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ush2AQ2QI47 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Ush2AQ2QI47 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ush2AQ2QI47 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Ush2AQ2QI47 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ush2AQ2QI47 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ush2AQ2QI47 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ush2AQ2QI47 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC8.16□□□□□ -1.1
Ush2AQ2QI47 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC8.16□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms