Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tff1Q08423 Gm9889-202ENSMUST00000206983 1577 ntBASIC12.97□□□□□ -0.33
Tff1Q08423 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tff1Q08423 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Tff1Q08423 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tff1Q08423 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tff1Q08423 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tff1Q08423 Gm32996-201ENSMUST00000199828 1447 ntBASIC12.96□□□□□ -0.33
Tff1Q08423 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Tff1Q08423 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tff1Q08423 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Tff1Q08423 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tff1Q08423 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tff1Q08423 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tff1Q08423 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Tff1Q08423 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Tff1Q08423 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tff1Q08423 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Tff1Q08423 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Tff1Q08423 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Tff1Q08423 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tff1Q08423 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Tff1Q08423 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC12.96□□□□□ -0.33
Tff1Q08423 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Tff1Q08423 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tff1Q08423 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.33
Tff1Q08423 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.33
Tff1Q08423 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.33
Tff1Q08423 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tff1Q08423 AC122351.1-201ENSMUST00000220467 126 ntBASIC12.96□□□□□ -0.33
Tff1Q08423 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Tff1Q08423 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.96□□□□□ -0.33
Tff1Q08423 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Tff1Q08423 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Tff1Q08423 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Tff1Q08423 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Tff1Q08423 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Tff1Q08423 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.34
Tff1Q08423 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.34
Tff1Q08423 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Tff1Q08423 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Tff1Q08423 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Tff1Q08423 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tff1Q08423 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tff1Q08423 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Tff1Q08423 Gm38327-201ENSMUST00000195852 1755 ntBASIC12.95□□□□□ -0.34
Tff1Q08423 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Tff1Q08423 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tff1Q08423 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tff1Q08423 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC12.95□□□□□ -0.34
Tff1Q08423 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC12.95□□□□□ -0.34
Tff1Q08423 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tff1Q08423 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tff1Q08423 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Tff1Q08423 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC12.95□□□□□ -0.34
Tff1Q08423 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tff1Q08423 Gm6858-201ENSMUST00000208582 1468 ntBASIC12.95□□□□□ -0.34
Tff1Q08423 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tff1Q08423 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tff1Q08423 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Tff1Q08423 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tff1Q08423 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tff1Q08423 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
Tff1Q08423 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tff1Q08423 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Tff1Q08423 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tff1Q08423 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Tff1Q08423 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tff1Q08423 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tff1Q08423 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.94□□□□□ -0.34
Tff1Q08423 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Tff1Q08423 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tff1Q08423 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tff1Q08423 Zkscan4-202ENSMUST00000225845 1506 ntBASIC12.94□□□□□ -0.34
Tff1Q08423 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Tff1Q08423 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Tff1Q08423 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tff1Q08423 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tff1Q08423 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tff1Q08423 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Tff1Q08423 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC12.94□□□□□ -0.34
Tff1Q08423 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Tff1Q08423 AC164629.2-201ENSMUST00000217916 270 ntBASIC12.94□□□□□ -0.34
Tff1Q08423 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tff1Q08423 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Tff1Q08423 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tff1Q08423 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tff1Q08423 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Tff1Q08423 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Tff1Q08423 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tff1Q08423 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tff1Q08423 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tff1Q08423 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tff1Q08423 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tff1Q08423 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tff1Q08423 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tff1Q08423 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tff1Q08423 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Tff1Q08423 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Tff1Q08423 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms