Protein–RNA interactions for Protein: Q01149

Col1a2, Collagen alpha-2(I) chain, mousemouse

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a2Q01149 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC19.37■□□□□ 0.69
Col1a2Q01149 Gm5628-201ENSMUST00000222318 1049 ntBASIC19.37■□□□□ 0.69
Col1a2Q01149 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC19.37■□□□□ 0.69
Col1a2Q01149 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col1a2Q01149 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col1a2Q01149 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC19.37■□□□□ 0.69
Col1a2Q01149 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col1a2Q01149 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Col1a2Q01149 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col1a2Q01149 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col1a2Q01149 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col1a2Q01149 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col1a2Q01149 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col1a2Q01149 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col1a2Q01149 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col1a2Q01149 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col1a2Q01149 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col1a2Q01149 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col1a2Q01149 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Col1a2Q01149 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col1a2Q01149 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col1a2Q01149 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col1a2Q01149 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col1a2Q01149 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col1a2Q01149 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col1a2Q01149 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Col1a2Q01149 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
Col1a2Q01149 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col1a2Q01149 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC19.36■□□□□ 0.69
Col1a2Q01149 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC19.36■□□□□ 0.69
Col1a2Q01149 CT025555.1-201ENSMUST00000225901 1217 ntBASIC19.36■□□□□ 0.69
Col1a2Q01149 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col1a2Q01149 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Col1a2Q01149 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Col1a2Q01149 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col1a2Q01149 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Col1a2Q01149 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col1a2Q01149 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Col1a2Q01149 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col1a2Q01149 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
Col1a2Q01149 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Col1a2Q01149 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col1a2Q01149 Gm44335-201ENSMUST00000196879 141 ntBASIC19.35■□□□□ 0.69
Col1a2Q01149 Gm44297-201ENSMUST00000198304 141 ntBASIC19.35■□□□□ 0.69
Col1a2Q01149 Gm44346-201ENSMUST00000198851 141 ntBASIC19.35■□□□□ 0.69
Col1a2Q01149 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC19.35■□□□□ 0.69
Col1a2Q01149 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
Col1a2Q01149 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
Col1a2Q01149 Gpr146-202ENSMUST00000053120 1040 ntBASIC19.35■□□□□ 0.69
Col1a2Q01149 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col1a2Q01149 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col1a2Q01149 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col1a2Q01149 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col1a2Q01149 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Col1a2Q01149 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col1a2Q01149 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC19.35■□□□□ 0.69
Col1a2Q01149 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col1a2Q01149 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC19.35■□□□□ 0.69
Col1a2Q01149 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.35■□□□□ 0.69
Col1a2Q01149 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Col1a2Q01149 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col1a2Q01149 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC19.34■□□□□ 0.69
Col1a2Q01149 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col1a2Q01149 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC19.34■□□□□ 0.69
Col1a2Q01149 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Col1a2Q01149 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC19.34■□□□□ 0.69
Col1a2Q01149 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC19.34■□□□□ 0.69
Col1a2Q01149 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col1a2Q01149 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col1a2Q01149 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC19.34■□□□□ 0.69
Col1a2Q01149 Gm10154-201ENSMUST00000084445 354 ntBASIC19.34■□□□□ 0.69
Col1a2Q01149 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Col1a2Q01149 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Col1a2Q01149 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col1a2Q01149 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col1a2Q01149 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Col1a2Q01149 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col1a2Q01149 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col1a2Q01149 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col1a2Q01149 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Col1a2Q01149 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Col1a2Q01149 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Col1a2Q01149 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Col1a2Q01149 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC19.33■□□□□ 0.69
Col1a2Q01149 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Col1a2Q01149 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Col1a2Q01149 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Col1a2Q01149 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.33■□□□□ 0.69
Col1a2Q01149 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Col1a2Q01149 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Col1a2Q01149 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Col1a2Q01149 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Col1a2Q01149 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Col1a2Q01149 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Col1a2Q01149 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC19.33■□□□□ 0.68
Col1a2Q01149 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Col1a2Q01149 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Col1a2Q01149 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC19.32■□□□□ 0.68
Col1a2Q01149 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Col1a2Q01149 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms