Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Gm8520-201ENSMUST00000186517 868 ntBASIC14.26□□□□□ -0.13
Scn1bP97952 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC14.26□□□□□ -0.13
Scn1bP97952 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn1bP97952 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn1bP97952 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn1bP97952 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Scn1bP97952 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Scn1bP97952 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn1bP97952 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn1bP97952 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Scn1bP97952 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn1bP97952 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn1bP97952 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Scn1bP97952 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn1bP97952 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.25□□□□□ -0.13
Scn1bP97952 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn1bP97952 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.25□□□□□ -0.13
Scn1bP97952 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn1bP97952 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn1bP97952 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn1bP97952 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn1bP97952 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn1bP97952 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scn1bP97952 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scn1bP97952 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn1bP97952 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.25□□□□□ -0.13
Scn1bP97952 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Scn1bP97952 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scn1bP97952 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scn1bP97952 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC14.25□□□□□ -0.13
Scn1bP97952 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn1bP97952 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scn1bP97952 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Scn1bP97952 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scn1bP97952 AC154649.1-201ENSMUST00000227392 384 ntBASIC14.25□□□□□ -0.13
Scn1bP97952 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn1bP97952 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn1bP97952 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn1bP97952 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn1bP97952 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scn1bP97952 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn1bP97952 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scn1bP97952 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn1bP97952 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Scn1bP97952 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Scn1bP97952 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn1bP97952 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn1bP97952 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Scn1bP97952 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Scn1bP97952 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC14.24□□□□□ -0.13
Scn1bP97952 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn1bP97952 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Scn1bP97952 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn1bP97952 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.24□□□□□ -0.13
Scn1bP97952 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.24□□□□□ -0.13
Scn1bP97952 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn1bP97952 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn1bP97952 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scn1bP97952 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Scn1bP97952 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scn1bP97952 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scn1bP97952 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.24□□□□□ -0.13
Scn1bP97952 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Scn1bP97952 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scn1bP97952 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC14.24□□□□□ -0.13
Scn1bP97952 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scn1bP97952 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scn1bP97952 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn1bP97952 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn1bP97952 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scn1bP97952 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn1bP97952 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn1bP97952 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn1bP97952 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Scn1bP97952 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.23□□□□□ -0.13
Scn1bP97952 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn1bP97952 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn1bP97952 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn1bP97952 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Scn1bP97952 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC14.23□□□□□ -0.13
Scn1bP97952 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Scn1bP97952 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Scn1bP97952 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn1bP97952 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.23□□□□□ -0.13
Scn1bP97952 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn1bP97952 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Scn1bP97952 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn1bP97952 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn1bP97952 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.23□□□□□ -0.13
Scn1bP97952 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Scn1bP97952 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn1bP97952 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn1bP97952 Gm7638-201ENSMUST00000121348 967 ntBASIC14.23□□□□□ -0.13
Scn1bP97952 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Scn1bP97952 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.23□□□□□ -0.13
Scn1bP97952 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn1bP97952 Gm16042-201ENSMUST00000204813 1247 ntBASIC14.23□□□□□ -0.13
Scn1bP97952 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn1bP97952 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn1bP97952 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms