Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.7□□□□□ -0.06
Nkx3-2P97503 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx3-2P97503 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx3-2P97503 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx3-2P97503 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx3-2P97503 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx3-2P97503 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx3-2P97503 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
Nkx3-2P97503 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.7□□□□□ -0.06
Nkx3-2P97503 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx3-2P97503 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Nkx3-2P97503 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Nkx3-2P97503 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
Nkx3-2P97503 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx3-2P97503 Gm11764-201ENSMUST00000120221 623 ntBASIC14.69□□□□□ -0.06
Nkx3-2P97503 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.69□□□□□ -0.06
Nkx3-2P97503 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx3-2P97503 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.69□□□□□ -0.06
Nkx3-2P97503 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx3-2P97503 Gm18622-201ENSMUST00000219361 595 ntBASIC14.69□□□□□ -0.06
Nkx3-2P97503 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Nkx3-2P97503 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx3-2P97503 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
Nkx3-2P97503 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx3-2P97503 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.69□□□□□ -0.06
Nkx3-2P97503 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx3-2P97503 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx3-2P97503 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx3-2P97503 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx3-2P97503 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx3-2P97503 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx3-2P97503 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx3-2P97503 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.68□□□□□ -0.06
Nkx3-2P97503 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx3-2P97503 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.68□□□□□ -0.06
Nkx3-2P97503 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx3-2P97503 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx3-2P97503 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.68□□□□□ -0.06
Nkx3-2P97503 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx3-2P97503 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx3-2P97503 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx3-2P97503 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.68□□□□□ -0.06
Nkx3-2P97503 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.68□□□□□ -0.06
Nkx3-2P97503 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.68□□□□□ -0.06
Nkx3-2P97503 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx3-2P97503 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.68□□□□□ -0.06
Nkx3-2P97503 Psmb5-202ENSMUST00000227257 622 ntBASIC14.68□□□□□ -0.06
Nkx3-2P97503 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Nkx3-2P97503 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Nkx3-2P97503 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx3-2P97503 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx3-2P97503 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx3-2P97503 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx3-2P97503 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.68□□□□□ -0.06
Nkx3-2P97503 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx3-2P97503 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.68□□□□□ -0.06
Nkx3-2P97503 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx3-2P97503 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Nkx3-2P97503 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx3-2P97503 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx3-2P97503 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx3-2P97503 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Nkx3-2P97503 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx3-2P97503 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx3-2P97503 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx3-2P97503 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx3-2P97503 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx3-2P97503 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx3-2P97503 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx3-2P97503 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx3-2P97503 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx3-2P97503 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx3-2P97503 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx3-2P97503 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
Nkx3-2P97503 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx3-2P97503 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx3-2P97503 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx3-2P97503 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx3-2P97503 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Nkx3-2P97503 Gm15173-201ENSMUST00000122049 433 ntBASIC14.67□□□□□ -0.06
Nkx3-2P97503 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.67□□□□□ -0.06
Nkx3-2P97503 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.67□□□□□ -0.06
Nkx3-2P97503 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.67□□□□□ -0.06
Nkx3-2P97503 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.67□□□□□ -0.06
Nkx3-2P97503 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx3-2P97503 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx3-2P97503 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx3-2P97503 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx3-2P97503 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx3-2P97503 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx3-2P97503 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Nkx3-2P97503 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
Nkx3-2P97503 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Nkx3-2P97503 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx3-2P97503 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx3-2P97503 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.66□□□□□ -0.06
Nkx3-2P97503 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx3-2P97503 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx3-2P97503 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx3-2P97503 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms