Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pdlim4P70271 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pdlim4P70271 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pdlim4P70271 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pdlim4P70271 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Pdlim4P70271 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pdlim4P70271 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Pdlim4P70271 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pdlim4P70271 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pdlim4P70271 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pdlim4P70271 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pdlim4P70271 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pdlim4P70271 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pdlim4P70271 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pdlim4P70271 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pdlim4P70271 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pdlim4P70271 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pdlim4P70271 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pdlim4P70271 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pdlim4P70271 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Pdlim4P70271 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pdlim4P70271 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Pdlim4P70271 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pdlim4P70271 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Pdlim4P70271 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pdlim4P70271 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pdlim4P70271 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pdlim4P70271 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Pdlim4P70271 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Pdlim4P70271 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pdlim4P70271 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pdlim4P70271 Gm7506-201ENSMUST00000207758 815 ntBASIC12.95□□□□□ -0.34
Pdlim4P70271 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC12.95□□□□□ -0.34
Pdlim4P70271 Vti1a-206ENSMUST00000225529 1244 ntBASIC12.95□□□□□ -0.34
Pdlim4P70271 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Pdlim4P70271 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pdlim4P70271 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pdlim4P70271 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pdlim4P70271 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pdlim4P70271 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pdlim4P70271 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Pdlim4P70271 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pdlim4P70271 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.95□□□□□ -0.34
Pdlim4P70271 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pdlim4P70271 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Pdlim4P70271 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pdlim4P70271 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pdlim4P70271 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC12.94□□□□□ -0.34
Pdlim4P70271 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdlim4P70271 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdlim4P70271 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC12.94□□□□□ -0.34
Pdlim4P70271 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC12.94□□□□□ -0.34
Pdlim4P70271 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdlim4P70271 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdlim4P70271 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdlim4P70271 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdlim4P70271 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdlim4P70271 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdlim4P70271 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdlim4P70271 Gm12497-201ENSMUST00000138778 237 ntBASIC12.94□□□□□ -0.34
Pdlim4P70271 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdlim4P70271 Gm6257-201ENSMUST00000163864 910 ntBASIC12.94□□□□□ -0.34
Pdlim4P70271 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pdlim4P70271 Gm34391-201ENSMUST00000203706 907 ntBASIC12.94□□□□□ -0.34
Pdlim4P70271 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC12.94□□□□□ -0.34
Pdlim4P70271 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdlim4P70271 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdlim4P70271 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdlim4P70271 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdlim4P70271 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pdlim4P70271 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdlim4P70271 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdlim4P70271 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdlim4P70271 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdlim4P70271 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdlim4P70271 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdlim4P70271 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Pdlim4P70271 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdlim4P70271 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdlim4P70271 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdlim4P70271 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pdlim4P70271 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdlim4P70271 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Pdlim4P70271 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdlim4P70271 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdlim4P70271 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Pdlim4P70271 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pdlim4P70271 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Pdlim4P70271 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pdlim4P70271 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pdlim4P70271 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pdlim4P70271 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pdlim4P70271 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pdlim4P70271 Wnt10b-206ENSMUST00000228546 2709 ntBASIC12.93□□□□□ -0.34
Pdlim4P70271 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pdlim4P70271 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pdlim4P70271 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pdlim4P70271 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pdlim4P70271 Gm4609-201ENSMUST00000106443 1002 ntBASIC12.93□□□□□ -0.34
Pdlim4P70271 Gm5138-201ENSMUST00000113842 1002 ntBASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms