Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rpl39P62892 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC11.13□□□□□ -0.63
Rpl39P62892 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rpl39P62892 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rpl39P62892 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rpl39P62892 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rpl39P62892 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rpl39P62892 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rpl39P62892 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rpl39P62892 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Rpl39P62892 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rpl39P62892 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rpl39P62892 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rpl39P62892 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rpl39P62892 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rpl39P62892 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rpl39P62892 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rpl39P62892 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC11.12□□□□□ -0.63
Rpl39P62892 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Rpl39P62892 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC11.12□□□□□ -0.63
Rpl39P62892 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rpl39P62892 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rpl39P62892 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Rpl39P62892 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rpl39P62892 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rpl39P62892 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rpl39P62892 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rpl39P62892 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Rpl39P62892 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC11.12□□□□□ -0.63
Rpl39P62892 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC11.12□□□□□ -0.63
Rpl39P62892 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rpl39P62892 Arhgef4-208ENSMUST00000211073 171 ntBASIC11.12□□□□□ -0.63
Rpl39P62892 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC11.12□□□□□ -0.63
Rpl39P62892 Gm7370-201ENSMUST00000219471 767 ntBASIC11.12□□□□□ -0.63
Rpl39P62892 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Rpl39P62892 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rpl39P62892 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rpl39P62892 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rpl39P62892 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rpl39P62892 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Rpl39P62892 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rpl39P62892 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rpl39P62892 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rpl39P62892 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rpl39P62892 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC11.12□□□□□ -0.63
Rpl39P62892 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rpl39P62892 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
Rpl39P62892 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rpl39P62892 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rpl39P62892 Gm6858-201ENSMUST00000208582 1468 ntBASIC11.12□□□□□ -0.63
Rpl39P62892 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rpl39P62892 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
Rpl39P62892 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rpl39P62892 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rpl39P62892 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Rpl39P62892 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Rpl39P62892 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rpl39P62892 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rpl39P62892 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC11.11□□□□□ -0.63
Rpl39P62892 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rpl39P62892 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rpl39P62892 AC132265.1-201ENSMUST00000219233 1665 ntBASIC11.11□□□□□ -0.63
Rpl39P62892 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rpl39P62892 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rpl39P62892 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rpl39P62892 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rpl39P62892 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Rpl39P62892 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rpl39P62892 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rpl39P62892 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rpl39P62892 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Rpl39P62892 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rpl39P62892 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rpl39P62892 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rpl39P62892 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rpl39P62892 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rpl39P62892 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rpl39P62892 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC11.11□□□□□ -0.63
Rpl39P62892 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rpl39P62892 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rpl39P62892 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rpl39P62892 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rpl39P62892 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rpl39P62892 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Rpl39P62892 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rpl39P62892 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Rpl39P62892 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rpl39P62892 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rpl39P62892 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Rpl39P62892 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rpl39P62892 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rpl39P62892 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rpl39P62892 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
Rpl39P62892 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rpl39P62892 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Rpl39P62892 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rpl39P62892 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rpl39P62892 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rpl39P62892 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rpl39P62892 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms