Protein–RNA interactions for Protein: P62812

Gabra1, Gamma-aminobutyric acid receptor subunit alpha-1, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabra1P62812 Gm32996-201ENSMUST00000199828 1447 ntBASIC13.14□□□□□ -0.31
Gabra1P62812 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Gabra1P62812 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Gabra1P62812 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Gabra1P62812 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gabra1P62812 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Gabra1P62812 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gabra1P62812 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gabra1P62812 Gm13181-201ENSMUST00000120117 1069 ntBASIC13.14□□□□□ -0.31
Gabra1P62812 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Gabra1P62812 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gabra1P62812 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC13.14□□□□□ -0.31
Gabra1P62812 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gabra1P62812 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gabra1P62812 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gabra1P62812 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gabra1P62812 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gabra1P62812 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Gabra1P62812 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Gabra1P62812 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gabra1P62812 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gabra1P62812 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.14□□□□□ -0.31
Gabra1P62812 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Gabra1P62812 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gabra1P62812 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gabra1P62812 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gabra1P62812 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gabra1P62812 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gabra1P62812 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gabra1P62812 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gabra1P62812 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gabra1P62812 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gabra1P62812 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Gabra1P62812 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gabra1P62812 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gabra1P62812 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Gabra1P62812 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
Gabra1P62812 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gabra1P62812 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gabra1P62812 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gabra1P62812 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
Gabra1P62812 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Gabra1P62812 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gabra1P62812 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gabra1P62812 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Gabra1P62812 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gabra1P62812 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Gabra1P62812 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC13.13□□□□□ -0.31
Gabra1P62812 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC13.13□□□□□ -0.31
Gabra1P62812 Gm29257-201ENSMUST00000186115 639 ntBASIC13.13□□□□□ -0.31
Gabra1P62812 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gabra1P62812 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gabra1P62812 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Gabra1P62812 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gabra1P62812 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
Gabra1P62812 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Gabra1P62812 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Gabra1P62812 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gabra1P62812 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.13□□□□□ -0.31
Gabra1P62812 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC13.13□□□□□ -0.31
Gabra1P62812 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gabra1P62812 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gabra1P62812 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gabra1P62812 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gabra1P62812 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gabra1P62812 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC13.12□□□□□ -0.31
Gabra1P62812 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gabra1P62812 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Gabra1P62812 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Gabra1P62812 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Gabra1P62812 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gabra1P62812 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gabra1P62812 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.12□□□□□ -0.31
Gabra1P62812 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gabra1P62812 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gabra1P62812 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.12□□□□□ -0.31
Gabra1P62812 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gabra1P62812 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Gabra1P62812 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gabra1P62812 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gabra1P62812 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Gabra1P62812 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Gabra1P62812 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Gabra1P62812 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Gabra1P62812 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gabra1P62812 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Gabra1P62812 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.11□□□□□ -0.31
Gabra1P62812 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.11□□□□□ -0.31
Gabra1P62812 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gabra1P62812 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gabra1P62812 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gabra1P62812 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gabra1P62812 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Gabra1P62812 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gabra1P62812 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gabra1P62812 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Gabra1P62812 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gabra1P62812 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Gabra1P62812 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gabra1P62812 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms