Protein–RNA interactions for Protein: P62069

Usp46, Ubiquitin carboxyl-terminal hydrolase 46, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp46P62069 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.29■□□□□ 0.2
Usp46P62069 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp46P62069 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.28■□□□□ 0.2
Usp46P62069 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Usp46P62069 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp46P62069 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp46P62069 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Usp46P62069 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp46P62069 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Usp46P62069 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp46P62069 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp46P62069 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp46P62069 Gm15358-201ENSMUST00000119249 520 ntBASIC16.28■□□□□ 0.2
Usp46P62069 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp46P62069 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.28■□□□□ 0.2
Usp46P62069 Gm43332-201ENSMUST00000202511 1044 ntBASIC16.28■□□□□ 0.2
Usp46P62069 Gm32390-201ENSMUST00000212713 1172 ntBASIC16.28■□□□□ 0.2
Usp46P62069 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Usp46P62069 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp46P62069 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp46P62069 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.28■□□□□ 0.2
Usp46P62069 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp46P62069 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp46P62069 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp46P62069 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp46P62069 AC122901.1-201ENSMUST00000214203 1790 ntBASIC16.28■□□□□ 0.2
Usp46P62069 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp46P62069 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Usp46P62069 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.27■□□□□ 0.2
Usp46P62069 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Usp46P62069 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp46P62069 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp46P62069 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp46P62069 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Usp46P62069 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp46P62069 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp46P62069 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC16.27■□□□□ 0.2
Usp46P62069 Gm14140-201ENSMUST00000119999 995 ntBASIC16.27■□□□□ 0.2
Usp46P62069 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Usp46P62069 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC16.27■□□□□ 0.2
Usp46P62069 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Usp46P62069 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
Usp46P62069 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Usp46P62069 Gm42670-201ENSMUST00000201816 1292 ntBASIC16.27■□□□□ 0.2
Usp46P62069 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.27■□□□□ 0.2
Usp46P62069 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.27■□□□□ 0.2
Usp46P62069 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp46P62069 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp46P62069 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp46P62069 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp46P62069 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp46P62069 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp46P62069 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Usp46P62069 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.27■□□□□ 0.19
Usp46P62069 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Usp46P62069 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Usp46P62069 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.27■□□□□ 0.19
Usp46P62069 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Usp46P62069 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Usp46P62069 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Usp46P62069 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Usp46P62069 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp46P62069 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp46P62069 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp46P62069 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp46P62069 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp46P62069 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.26■□□□□ 0.19
Usp46P62069 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Usp46P62069 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp46P62069 AC084391.1-201ENSMUST00000200651 141 ntBASIC16.26■□□□□ 0.19
Usp46P62069 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC16.26■□□□□ 0.19
Usp46P62069 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC16.26■□□□□ 0.19
Usp46P62069 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp46P62069 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC16.26■□□□□ 0.19
Usp46P62069 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Usp46P62069 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp46P62069 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Usp46P62069 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp46P62069 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp46P62069 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp46P62069 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp46P62069 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp46P62069 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.25■□□□□ 0.19
Usp46P62069 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.25■□□□□ 0.19
Usp46P62069 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp46P62069 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp46P62069 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp46P62069 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp46P62069 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp46P62069 Gm43930-201ENSMUST00000203868 845 ntBASIC16.25■□□□□ 0.19
Usp46P62069 Gm19164-201ENSMUST00000210667 640 ntBASIC16.25■□□□□ 0.19
Usp46P62069 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.25■□□□□ 0.19
Usp46P62069 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp46P62069 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp46P62069 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp46P62069 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.25■□□□□ 0.19
Usp46P62069 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp46P62069 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.25■□□□□ 0.19
Usp46P62069 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp46P62069 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms