Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC12.61□□□□□ -0.39
Sssca1P56873 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sssca1P56873 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC12.61□□□□□ -0.39
Sssca1P56873 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sssca1P56873 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC12.61□□□□□ -0.39
Sssca1P56873 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC12.61□□□□□ -0.39
Sssca1P56873 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC12.61□□□□□ -0.39
Sssca1P56873 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sssca1P56873 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC12.61□□□□□ -0.39
Sssca1P56873 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sssca1P56873 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sssca1P56873 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.61□□□□□ -0.39
Sssca1P56873 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sssca1P56873 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Sssca1P56873 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sssca1P56873 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sssca1P56873 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sssca1P56873 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sssca1P56873 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sssca1P56873 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sssca1P56873 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sssca1P56873 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sssca1P56873 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Sssca1P56873 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sssca1P56873 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sssca1P56873 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.6□□□□□ -0.39
Sssca1P56873 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC12.6□□□□□ -0.39
Sssca1P56873 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.6□□□□□ -0.39
Sssca1P56873 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sssca1P56873 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sssca1P56873 Gm13559-201ENSMUST00000120476 863 ntBASIC12.6□□□□□ -0.39
Sssca1P56873 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC12.6□□□□□ -0.39
Sssca1P56873 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sssca1P56873 Gm20472-201ENSMUST00000174403 1240 ntBASIC12.6□□□□□ -0.39
Sssca1P56873 Gm37722-201ENSMUST00000193757 208 ntBASIC12.6□□□□□ -0.39
Sssca1P56873 Gm45058-201ENSMUST00000205810 766 ntBASIC12.6□□□□□ -0.39
Sssca1P56873 Gm18959-201ENSMUST00000208954 655 ntBASIC12.6□□□□□ -0.39
Sssca1P56873 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sssca1P56873 Gm10584-201ENSMUST00000207036 2628 ntBASIC12.6□□□□□ -0.39
Sssca1P56873 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sssca1P56873 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sssca1P56873 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sssca1P56873 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sssca1P56873 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sssca1P56873 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Sssca1P56873 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sssca1P56873 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Sssca1P56873 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sssca1P56873 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sssca1P56873 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.6□□□□□ -0.39
Sssca1P56873 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sssca1P56873 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sssca1P56873 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Sssca1P56873 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sssca1P56873 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sssca1P56873 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sssca1P56873 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sssca1P56873 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Sssca1P56873 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sssca1P56873 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sssca1P56873 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Sssca1P56873 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sssca1P56873 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sssca1P56873 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sssca1P56873 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC12.59□□□□□ -0.39
Sssca1P56873 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sssca1P56873 Gm9484-201ENSMUST00000195892 1159 ntBASIC12.59□□□□□ -0.39
Sssca1P56873 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sssca1P56873 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Sssca1P56873 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sssca1P56873 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Sssca1P56873 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sssca1P56873 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.59□□□□□ -0.39
Sssca1P56873 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sssca1P56873 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Sssca1P56873 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sssca1P56873 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sssca1P56873 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sssca1P56873 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sssca1P56873 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.59□□□□□ -0.39
Sssca1P56873 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Sssca1P56873 BC037039-201ENSMUST00000192003 2205 ntBASIC12.58□□□□□ -0.39
Sssca1P56873 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sssca1P56873 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Sssca1P56873 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sssca1P56873 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sssca1P56873 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Sssca1P56873 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Sssca1P56873 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sssca1P56873 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sssca1P56873 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Sssca1P56873 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sssca1P56873 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sssca1P56873 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC12.58□□□□□ -0.4
Sssca1P56873 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC12.58□□□□□ -0.4
Sssca1P56873 Gm6257-201ENSMUST00000163864 910 ntBASIC12.58□□□□□ -0.4
Sssca1P56873 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sssca1P56873 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sssca1P56873 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sssca1P56873 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms