Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdkn2bP55271 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cdkn2bP55271 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdkn2bP55271 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdkn2bP55271 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdkn2bP55271 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdkn2bP55271 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdkn2bP55271 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Cdkn2bP55271 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.91□□□□□ -0.02
Cdkn2bP55271 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdkn2bP55271 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdkn2bP55271 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cdkn2bP55271 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cdkn2bP55271 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Cdkn2bP55271 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cdkn2bP55271 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC14.91□□□□□ -0.02
Cdkn2bP55271 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Cdkn2bP55271 Gm6345-202ENSMUST00000180900 204 ntBASIC14.91□□□□□ -0.02
Cdkn2bP55271 Gm5587-201ENSMUST00000206270 674 ntBASIC14.91□□□□□ -0.02
Cdkn2bP55271 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC14.91□□□□□ -0.02
Cdkn2bP55271 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdkn2bP55271 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdkn2bP55271 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdkn2bP55271 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Cdkn2bP55271 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdkn2bP55271 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdkn2bP55271 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cdkn2bP55271 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdkn2bP55271 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.91□□□□□ -0.02
Cdkn2bP55271 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Cdkn2bP55271 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdkn2bP55271 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.9□□□□□ -0.02
Cdkn2bP55271 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cdkn2bP55271 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Cdkn2bP55271 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdkn2bP55271 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdkn2bP55271 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdkn2bP55271 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.9□□□□□ -0.02
Cdkn2bP55271 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdkn2bP55271 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Cdkn2bP55271 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Cdkn2bP55271 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cdkn2bP55271 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdkn2bP55271 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Cdkn2bP55271 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdkn2bP55271 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cdkn2bP55271 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cdkn2bP55271 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdkn2bP55271 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.9□□□□□ -0.02
Cdkn2bP55271 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.9□□□□□ -0.02
Cdkn2bP55271 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cdkn2bP55271 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cdkn2bP55271 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdkn2bP55271 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdkn2bP55271 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdkn2bP55271 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdkn2bP55271 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.9□□□□□ -0.02
Cdkn2bP55271 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdkn2bP55271 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.9□□□□□ -0.02
Cdkn2bP55271 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdkn2bP55271 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdkn2bP55271 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdkn2bP55271 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdkn2bP55271 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cdkn2bP55271 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.9□□□□□ -0.02
Cdkn2bP55271 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdkn2bP55271 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdkn2bP55271 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cdkn2bP55271 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.9□□□□□ -0.02
Cdkn2bP55271 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cdkn2bP55271 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
Cdkn2bP55271 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdkn2bP55271 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdkn2bP55271 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdkn2bP55271 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC14.89□□□□□ -0.03
Cdkn2bP55271 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.89□□□□□ -0.03
Cdkn2bP55271 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdkn2bP55271 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
Cdkn2bP55271 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.89□□□□□ -0.03
Cdkn2bP55271 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cdkn2bP55271 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.89□□□□□ -0.03
Cdkn2bP55271 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
Cdkn2bP55271 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdkn2bP55271 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Cdkn2bP55271 Gm13312-201ENSMUST00000119631 718 ntBASIC14.89□□□□□ -0.03
Cdkn2bP55271 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Cdkn2bP55271 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC14.89□□□□□ -0.03
Cdkn2bP55271 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
Cdkn2bP55271 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdkn2bP55271 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Cdkn2bP55271 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdkn2bP55271 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdkn2bP55271 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.89□□□□□ -0.03
Cdkn2bP55271 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdkn2bP55271 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdkn2bP55271 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cdkn2bP55271 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cdkn2bP55271 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cdkn2bP55271 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.89□□□□□ -0.03
Cdkn2bP55271 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms