Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ddx6P54823 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ddx6P54823 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ddx6P54823 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ddx6P54823 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ddx6P54823 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ddx6P54823 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Ddx6P54823 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ddx6P54823 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Ddx6P54823 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx6P54823 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx6P54823 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx6P54823 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx6P54823 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx6P54823 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx6P54823 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx6P54823 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx6P54823 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx6P54823 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx6P54823 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx6P54823 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
Ddx6P54823 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
Ddx6P54823 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Ddx6P54823 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Ddx6P54823 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC15.76■□□□□ 0.11
Ddx6P54823 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx6P54823 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx6P54823 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.76■□□□□ 0.11
Ddx6P54823 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx6P54823 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.76■□□□□ 0.11
Ddx6P54823 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx6P54823 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx6P54823 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx6P54823 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx6P54823 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Ddx6P54823 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx6P54823 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx6P54823 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx6P54823 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx6P54823 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.75■□□□□ 0.11
Ddx6P54823 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx6P54823 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx6P54823 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC15.75■□□□□ 0.11
Ddx6P54823 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC15.75■□□□□ 0.11
Ddx6P54823 Gm6226-201ENSMUST00000117765 1146 ntBASIC15.75■□□□□ 0.11
Ddx6P54823 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.75■□□□□ 0.11
Ddx6P54823 Gm10499-201ENSMUST00000174094 934 ntBASIC15.75■□□□□ 0.11
Ddx6P54823 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC15.75■□□□□ 0.11
Ddx6P54823 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC15.75■□□□□ 0.11
Ddx6P54823 AC154621.1-201ENSMUST00000226155 1119 ntBASIC15.75■□□□□ 0.11
Ddx6P54823 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx6P54823 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx6P54823 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx6P54823 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx6P54823 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx6P54823 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Ddx6P54823 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx6P54823 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx6P54823 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx6P54823 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx6P54823 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx6P54823 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Ddx6P54823 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx6P54823 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Ddx6P54823 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx6P54823 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx6P54823 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Ddx6P54823 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx6P54823 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Ddx6P54823 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Ddx6P54823 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx6P54823 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Ddx6P54823 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC15.74■□□□□ 0.11
Ddx6P54823 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC15.74■□□□□ 0.11
Ddx6P54823 AC155252.2-201ENSMUST00000226946 680 ntBASIC15.74■□□□□ 0.11
Ddx6P54823 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx6P54823 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx6P54823 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.74■□□□□ 0.11
Ddx6P54823 Gm13410-201ENSMUST00000117058 1415 ntBASIC15.74■□□□□ 0.11
Ddx6P54823 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx6P54823 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx6P54823 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx6P54823 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.74■□□□□ 0.11
Ddx6P54823 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Ddx6P54823 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx6P54823 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx6P54823 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.73■□□□□ 0.11
Ddx6P54823 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx6P54823 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx6P54823 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx6P54823 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx6P54823 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC15.73■□□□□ 0.11
Ddx6P54823 Gm37171-201ENSMUST00000192636 1185 ntBASIC15.73■□□□□ 0.11
Ddx6P54823 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx6P54823 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx6P54823 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx6P54823 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx6P54823 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx6P54823 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.73■□□□□ 0.11
Ddx6P54823 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms