Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Atxn1P54254 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Atxn1P54254 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Atxn1P54254 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Atxn1P54254 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Atxn1P54254 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Atxn1P54254 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Atxn1P54254 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Atxn1P54254 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Atxn1P54254 Fgf17-202ENSMUST00000227123 1336 ntBASIC15.43■□□□□ 0.06
Atxn1P54254 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Atxn1P54254 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Atxn1P54254 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Atxn1P54254 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Atxn1P54254 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Atxn1P54254 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Atxn1P54254 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Atxn1P54254 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
Atxn1P54254 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Atxn1P54254 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Atxn1P54254 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.42■□□□□ 0.06
Atxn1P54254 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Atxn1P54254 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Atxn1P54254 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Atxn1P54254 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Atxn1P54254 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Atxn1P54254 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Atxn1P54254 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Atxn1P54254 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Atxn1P54254 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Atxn1P54254 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Atxn1P54254 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Atxn1P54254 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Atxn1P54254 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC15.42■□□□□ 0.06
Atxn1P54254 Gm25406-201ENSMUST00000157599 105 ntBASIC15.42■□□□□ 0.06
Atxn1P54254 Gm4899-201ENSMUST00000178708 719 ntBASIC15.42■□□□□ 0.06
Atxn1P54254 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Atxn1P54254 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Atxn1P54254 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.42■□□□□ 0.06
Atxn1P54254 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC15.42■□□□□ 0.06
Atxn1P54254 Gm17968-201ENSMUST00000194902 784 ntBASIC15.42■□□□□ 0.06
Atxn1P54254 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.42■□□□□ 0.06
Atxn1P54254 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.42■□□□□ 0.06
Atxn1P54254 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Atxn1P54254 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Atxn1P54254 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Atxn1P54254 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Atxn1P54254 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Atxn1P54254 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Atxn1P54254 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Atxn1P54254 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Atxn1P54254 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Atxn1P54254 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Atxn1P54254 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Atxn1P54254 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Atxn1P54254 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Atxn1P54254 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Atxn1P54254 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Atxn1P54254 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Atxn1P54254 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Atxn1P54254 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Atxn1P54254 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Atxn1P54254 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC15.41■□□□□ 0.06
Atxn1P54254 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Atxn1P54254 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC15.41■□□□□ 0.06
Atxn1P54254 Gm13365-201ENSMUST00000121188 973 ntBASIC15.41■□□□□ 0.06
Atxn1P54254 Gm25948-201ENSMUST00000175334 112 ntBASIC15.41■□□□□ 0.06
Atxn1P54254 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Atxn1P54254 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC15.41■□□□□ 0.06
Atxn1P54254 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC15.41■□□□□ 0.06
Atxn1P54254 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC15.41■□□□□ 0.06
Atxn1P54254 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Atxn1P54254 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Atxn1P54254 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Atxn1P54254 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Atxn1P54254 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Atxn1P54254 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Atxn1P54254 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.41■□□□□ 0.06
Atxn1P54254 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Atxn1P54254 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Atxn1P54254 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Atxn1P54254 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Atxn1P54254 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Atxn1P54254 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Atxn1P54254 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Atxn1P54254 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Atxn1P54254 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.4■□□□□ 0.06
Atxn1P54254 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Atxn1P54254 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Atxn1P54254 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.4■□□□□ 0.06
Atxn1P54254 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Atxn1P54254 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Atxn1P54254 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Atxn1P54254 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Atxn1P54254 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Atxn1P54254 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Atxn1P54254 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Atxn1P54254 Gm12428-201ENSMUST00000119844 727 ntBASIC15.4■□□□□ 0.06
Atxn1P54254 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Atxn1P54254 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms