Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.92□□□□□ -0.02
Sox3P53784 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.92□□□□□ -0.02
Sox3P53784 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Sox3P53784 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox3P53784 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox3P53784 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
Sox3P53784 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.92□□□□□ -0.02
Sox3P53784 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.92□□□□□ -0.02
Sox3P53784 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox3P53784 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Sox3P53784 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox3P53784 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Sox3P53784 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox3P53784 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox3P53784 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox3P53784 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
Sox3P53784 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox3P53784 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox3P53784 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox3P53784 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Sox3P53784 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox3P53784 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Sox3P53784 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox3P53784 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox3P53784 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox3P53784 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.91□□□□□ -0.02
Sox3P53784 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.91□□□□□ -0.02
Sox3P53784 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Sox3P53784 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.91□□□□□ -0.02
Sox3P53784 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.91□□□□□ -0.02
Sox3P53784 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox3P53784 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.91□□□□□ -0.02
Sox3P53784 Gm18421-201ENSMUST00000204122 625 ntBASIC14.91□□□□□ -0.02
Sox3P53784 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Sox3P53784 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.91□□□□□ -0.02
Sox3P53784 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.91□□□□□ -0.02
Sox3P53784 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox3P53784 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox3P53784 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.91□□□□□ -0.02
Sox3P53784 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Sox3P53784 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox3P53784 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox3P53784 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox3P53784 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox3P53784 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox3P53784 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox3P53784 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Sox3P53784 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox3P53784 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox3P53784 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.9□□□□□ -0.02
Sox3P53784 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox3P53784 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox3P53784 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox3P53784 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Sox3P53784 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Sox3P53784 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox3P53784 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Sox3P53784 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox3P53784 Gm25745-201ENSMUST00000174945 133 ntBASIC14.9□□□□□ -0.02
Sox3P53784 Gm27321-201ENSMUST00000185021 205 ntBASIC14.9□□□□□ -0.02
Sox3P53784 Gm43438-201ENSMUST00000198133 379 ntBASIC14.9□□□□□ -0.02
Sox3P53784 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox3P53784 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox3P53784 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox3P53784 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sox3P53784 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sox3P53784 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox3P53784 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox3P53784 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox3P53784 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox3P53784 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
Sox3P53784 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox3P53784 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.9□□□□□ -0.02
Sox3P53784 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox3P53784 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox3P53784 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox3P53784 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox3P53784 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Sox3P53784 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sox3P53784 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox3P53784 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
Sox3P53784 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox3P53784 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sox3P53784 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox3P53784 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox3P53784 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.89□□□□□ -0.03
Sox3P53784 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
Sox3P53784 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox3P53784 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox3P53784 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox3P53784 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox3P53784 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox3P53784 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox3P53784 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox3P53784 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox3P53784 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox3P53784 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox3P53784 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
Sox3P53784 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox3P53784 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms