Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Nkx2-1P50220 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-1P50220 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.94□□□□□ -0.34
Nkx2-1P50220 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-1P50220 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-1P50220 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-1P50220 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-1P50220 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-1P50220 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Nkx2-1P50220 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Nkx2-1P50220 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-1P50220 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-1P50220 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-1P50220 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-1P50220 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.93□□□□□ -0.34
Nkx2-1P50220 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-1P50220 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Nkx2-1P50220 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Nkx2-1P50220 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-1P50220 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-1P50220 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-1P50220 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-1P50220 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-1P50220 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Nkx2-1P50220 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC12.93□□□□□ -0.34
Nkx2-1P50220 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-1P50220 Gm5417-201ENSMUST00000079706 384 ntBASIC12.93□□□□□ -0.34
Nkx2-1P50220 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-1P50220 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-1P50220 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-1P50220 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-1P50220 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-1P50220 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Nkx2-1P50220 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC12.93□□□□□ -0.34
Nkx2-1P50220 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-1P50220 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-1P50220 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Nkx2-1P50220 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-1P50220 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-1P50220 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-1P50220 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.92□□□□□ -0.34
Nkx2-1P50220 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-1P50220 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-1P50220 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-1P50220 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-1P50220 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
Nkx2-1P50220 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-1P50220 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC12.92□□□□□ -0.34
Nkx2-1P50220 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Nkx2-1P50220 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-1P50220 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.92□□□□□ -0.34
Nkx2-1P50220 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-1P50220 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-1P50220 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Nkx2-1P50220 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-1P50220 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-1P50220 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC12.92□□□□□ -0.34
Nkx2-1P50220 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC12.92□□□□□ -0.34
Nkx2-1P50220 Gm43353-201ENSMUST00000199224 1295 ntBASIC12.92□□□□□ -0.34
Nkx2-1P50220 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC12.92□□□□□ -0.34
Nkx2-1P50220 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC12.92□□□□□ -0.34
Nkx2-1P50220 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-1P50220 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Nkx2-1P50220 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-1P50220 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-1P50220 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-1P50220 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-1P50220 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-1P50220 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Nkx2-1P50220 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Nkx2-1P50220 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Nkx2-1P50220 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-1P50220 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Nkx2-1P50220 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Nkx2-1P50220 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.92□□□□□ -0.34
Nkx2-1P50220 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-1P50220 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-1P50220 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-1P50220 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-1P50220 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-1P50220 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-1P50220 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Nkx2-1P50220 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-1P50220 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-1P50220 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-1P50220 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-1P50220 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-1P50220 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-1P50220 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-1P50220 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-1P50220 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Nkx2-1P50220 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC12.91□□□□□ -0.34
Nkx2-1P50220 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC12.91□□□□□ -0.34
Nkx2-1P50220 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC12.91□□□□□ -0.34
Nkx2-1P50220 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC12.91□□□□□ -0.34
Nkx2-1P50220 Gm37055-201ENSMUST00000191866 133 ntBASIC12.91□□□□□ -0.34
Nkx2-1P50220 Gm30025-201ENSMUST00000218555 728 ntBASIC12.91□□□□□ -0.34
Nkx2-1P50220 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-1P50220 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Nkx2-1P50220 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms