Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Rfx3P48381 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx3P48381 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Rfx3P48381 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx3P48381 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx3P48381 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx3P48381 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx3P48381 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx3P48381 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx3P48381 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx3P48381 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx3P48381 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx3P48381 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx3P48381 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx3P48381 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rfx3P48381 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rfx3P48381 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Rfx3P48381 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.08□□□□□ -0.16
Rfx3P48381 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rfx3P48381 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfx3P48381 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfx3P48381 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfx3P48381 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rfx3P48381 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Rfx3P48381 Gm29518-201ENSMUST00000190858 372 ntBASIC14.08□□□□□ -0.16
Rfx3P48381 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC14.08□□□□□ -0.16
Rfx3P48381 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfx3P48381 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfx3P48381 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.08□□□□□ -0.16
Rfx3P48381 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfx3P48381 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfx3P48381 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfx3P48381 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rfx3P48381 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfx3P48381 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Rfx3P48381 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfx3P48381 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx3P48381 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx3P48381 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx3P48381 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx3P48381 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx3P48381 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx3P48381 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx3P48381 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx3P48381 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx3P48381 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx3P48381 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx3P48381 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx3P48381 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx3P48381 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx3P48381 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx3P48381 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx3P48381 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx3P48381 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14.07□□□□□ -0.16
Rfx3P48381 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx3P48381 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx3P48381 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx3P48381 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.07□□□□□ -0.16
Rfx3P48381 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Rfx3P48381 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Rfx3P48381 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.07□□□□□ -0.16
Rfx3P48381 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx3P48381 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Rfx3P48381 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx3P48381 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Rfx3P48381 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx3P48381 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx3P48381 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.07□□□□□ -0.16
Rfx3P48381 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx3P48381 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rfx3P48381 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Rfx3P48381 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rfx3P48381 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rfx3P48381 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Rfx3P48381 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rfx3P48381 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rfx3P48381 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rfx3P48381 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rfx3P48381 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rfx3P48381 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rfx3P48381 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.06□□□□□ -0.16
Rfx3P48381 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rfx3P48381 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rfx3P48381 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Rfx3P48381 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Rfx3P48381 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.06□□□□□ -0.16
Rfx3P48381 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Rfx3P48381 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rfx3P48381 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rfx3P48381 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rfx3P48381 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.06□□□□□ -0.16
Rfx3P48381 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rfx3P48381 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rfx3P48381 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Rfx3P48381 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.06□□□□□ -0.16
Rfx3P48381 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rfx3P48381 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rfx3P48381 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rfx3P48381 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.05□□□□□ -0.16
Rfx3P48381 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms