Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sox18P43680 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox18P43680 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Sox18P43680 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
Sox18P43680 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Sox18P43680 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sox18P43680 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.89□□□□□ -0.03
Sox18P43680 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.89□□□□□ -0.03
Sox18P43680 Gm18489-201ENSMUST00000172565 551 ntBASIC14.89□□□□□ -0.03
Sox18P43680 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sox18P43680 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.89□□□□□ -0.03
Sox18P43680 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox18P43680 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Sox18P43680 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox18P43680 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sox18P43680 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox18P43680 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox18P43680 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Sox18P43680 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox18P43680 Gm37744-201ENSMUST00000194616 1590 ntBASIC14.89□□□□□ -0.03
Sox18P43680 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.89□□□□□ -0.03
Sox18P43680 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox18P43680 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Sox18P43680 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox18P43680 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox18P43680 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Sox18P43680 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox18P43680 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sox18P43680 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox18P43680 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox18P43680 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox18P43680 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox18P43680 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox18P43680 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox18P43680 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox18P43680 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox18P43680 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox18P43680 Gm13216-201ENSMUST00000117145 591 ntBASIC14.88□□□□□ -0.03
Sox18P43680 Gm15358-201ENSMUST00000119249 520 ntBASIC14.88□□□□□ -0.03
Sox18P43680 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sox18P43680 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.88□□□□□ -0.03
Sox18P43680 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sox18P43680 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.88□□□□□ -0.03
Sox18P43680 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC14.88□□□□□ -0.03
Sox18P43680 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sox18P43680 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.88□□□□□ -0.03
Sox18P43680 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox18P43680 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox18P43680 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox18P43680 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox18P43680 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC14.88□□□□□ -0.03
Sox18P43680 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox18P43680 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox18P43680 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox18P43680 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox18P43680 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox18P43680 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC14.88□□□□□ -0.03
Sox18P43680 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox18P43680 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.88□□□□□ -0.03
Sox18P43680 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sox18P43680 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sox18P43680 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox18P43680 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox18P43680 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.87□□□□□ -0.03
Sox18P43680 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox18P43680 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox18P43680 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox18P43680 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox18P43680 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox18P43680 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Sox18P43680 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.87□□□□□ -0.03
Sox18P43680 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox18P43680 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox18P43680 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.87□□□□□ -0.03
Sox18P43680 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox18P43680 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sox18P43680 Gm10253-201ENSMUST00000194270 940 ntBASIC14.87□□□□□ -0.03
Sox18P43680 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sox18P43680 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox18P43680 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.87□□□□□ -0.03
Sox18P43680 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox18P43680 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox18P43680 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sox18P43680 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox18P43680 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox18P43680 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Sox18P43680 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox18P43680 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Sox18P43680 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sox18P43680 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.87□□□□□ -0.03
Sox18P43680 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox18P43680 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox18P43680 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Sox18P43680 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.87□□□□□ -0.03
Sox18P43680 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Sox18P43680 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox18P43680 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox18P43680 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.86□□□□□ -0.03
Sox18P43680 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Sox18P43680 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms