Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx2-2P42586 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx2-2P42586 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx2-2P42586 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx2-2P42586 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx2-2P42586 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx2-2P42586 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx2-2P42586 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx2-2P42586 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-2P42586 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-2P42586 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Nkx2-2P42586 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-2P42586 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Nkx2-2P42586 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-2P42586 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-2P42586 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-2P42586 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-2P42586 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-2P42586 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-2P42586 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-2P42586 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-2P42586 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Nkx2-2P42586 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.26□□□□□ -0.13
Nkx2-2P42586 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.26□□□□□ -0.13
Nkx2-2P42586 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Nkx2-2P42586 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.26□□□□□ -0.13
Nkx2-2P42586 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-2P42586 Rps4l-201ENSMUST00000071745 943 ntBASIC14.26□□□□□ -0.13
Nkx2-2P42586 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-2P42586 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-2P42586 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-2P42586 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-2P42586 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-2P42586 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.26□□□□□ -0.13
Nkx2-2P42586 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Nkx2-2P42586 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-2P42586 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.26□□□□□ -0.13
Nkx2-2P42586 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-2P42586 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-2P42586 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-2P42586 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-2P42586 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Nkx2-2P42586 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-2P42586 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-2P42586 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-2P42586 Gm25990-201ENSMUST00000102440 86 ntBASIC14.25□□□□□ -0.13
Nkx2-2P42586 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.25□□□□□ -0.13
Nkx2-2P42586 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Nkx2-2P42586 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.25□□□□□ -0.13
Nkx2-2P42586 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.25□□□□□ -0.13
Nkx2-2P42586 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.25□□□□□ -0.13
Nkx2-2P42586 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Nkx2-2P42586 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-2P42586 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-2P42586 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-2P42586 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-2P42586 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-2P42586 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-2P42586 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-2P42586 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.25□□□□□ -0.13
Nkx2-2P42586 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-2P42586 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-2P42586 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-2P42586 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.25□□□□□ -0.13
Nkx2-2P42586 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-2P42586 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.25□□□□□ -0.13
Nkx2-2P42586 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-2P42586 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.24□□□□□ -0.13
Nkx2-2P42586 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-2P42586 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-2P42586 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-2P42586 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-2P42586 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-2P42586 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-2P42586 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-2P42586 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.24□□□□□ -0.13
Nkx2-2P42586 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.24□□□□□ -0.13
Nkx2-2P42586 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.24□□□□□ -0.13
Nkx2-2P42586 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.24□□□□□ -0.13
Nkx2-2P42586 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-2P42586 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Nkx2-2P42586 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.24□□□□□ -0.13
Nkx2-2P42586 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.24□□□□□ -0.13
Nkx2-2P42586 Gm6089-201ENSMUST00000197666 938 ntBASIC14.24□□□□□ -0.13
Nkx2-2P42586 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.24□□□□□ -0.13
Nkx2-2P42586 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.24□□□□□ -0.13
Nkx2-2P42586 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-2P42586 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-2P42586 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-2P42586 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-2P42586 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-2P42586 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Nkx2-2P42586 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-2P42586 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Nkx2-2P42586 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-2P42586 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-2P42586 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.24□□□□□ -0.13
Nkx2-2P42586 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-2P42586 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Nkx2-2P42586 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms