Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmx3P42581 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmx3P42581 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Hmx3P42581 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmx3P42581 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hmx3P42581 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hmx3P42581 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Hmx3P42581 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmx3P42581 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmx3P42581 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmx3P42581 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmx3P42581 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC13.03□□□□□ -0.32
Hmx3P42581 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC13.03□□□□□ -0.32
Hmx3P42581 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC13.03□□□□□ -0.32
Hmx3P42581 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hmx3P42581 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hmx3P42581 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Hmx3P42581 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmx3P42581 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmx3P42581 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Hmx3P42581 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmx3P42581 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.03□□□□□ -0.32
Hmx3P42581 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Hmx3P42581 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Hmx3P42581 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hmx3P42581 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hmx3P42581 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hmx3P42581 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hmx3P42581 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hmx3P42581 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hmx3P42581 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Hmx3P42581 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hmx3P42581 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Hmx3P42581 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.33
Hmx3P42581 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Hmx3P42581 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hmx3P42581 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hmx3P42581 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Hmx3P42581 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Hmx3P42581 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hmx3P42581 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC13.02□□□□□ -0.33
Hmx3P42581 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Hmx3P42581 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hmx3P42581 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Hmx3P42581 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hmx3P42581 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC13.02□□□□□ -0.33
Hmx3P42581 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hmx3P42581 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hmx3P42581 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Hmx3P42581 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hmx3P42581 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hmx3P42581 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Hmx3P42581 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hmx3P42581 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hmx3P42581 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Hmx3P42581 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hmx3P42581 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hmx3P42581 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hmx3P42581 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hmx3P42581 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Hmx3P42581 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hmx3P42581 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hmx3P42581 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hmx3P42581 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hmx3P42581 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hmx3P42581 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hmx3P42581 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hmx3P42581 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Hmx3P42581 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC13.01□□□□□ -0.33
Hmx3P42581 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hmx3P42581 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Hmx3P42581 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hmx3P42581 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hmx3P42581 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hmx3P42581 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hmx3P42581 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.01□□□□□ -0.33
Hmx3P42581 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.01□□□□□ -0.33
Hmx3P42581 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hmx3P42581 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hmx3P42581 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hmx3P42581 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Hmx3P42581 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hmx3P42581 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.01□□□□□ -0.33
Hmx3P42581 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hmx3P42581 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.01□□□□□ -0.33
Hmx3P42581 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hmx3P42581 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hmx3P42581 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13□□□□□ -0.33
Hmx3P42581 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Hmx3P42581 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Hmx3P42581 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hmx3P42581 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hmx3P42581 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13□□□□□ -0.33
Hmx3P42581 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13□□□□□ -0.33
Hmx3P42581 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Hmx3P42581 Gm37728-201ENSMUST00000195025 2292 ntBASIC13□□□□□ -0.33
Hmx3P42581 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13□□□□□ -0.33
Hmx3P42581 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hmx3P42581 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hmx3P42581 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms