Protein–RNA interactions for Protein: P41778

Pbx1, Pre-B-cell leukemia transcription factor 1, mousemouse

Predictions only

Length 430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pbx1P41778 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pbx1P41778 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pbx1P41778 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pbx1P41778 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Pbx1P41778 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Pbx1P41778 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pbx1P41778 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pbx1P41778 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pbx1P41778 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pbx1P41778 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pbx1P41778 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
Pbx1P41778 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pbx1P41778 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pbx1P41778 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pbx1P41778 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.76■□□□□ 0.27
Pbx1P41778 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Pbx1P41778 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pbx1P41778 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pbx1P41778 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Pbx1P41778 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pbx1P41778 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pbx1P41778 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pbx1P41778 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pbx1P41778 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pbx1P41778 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pbx1P41778 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pbx1P41778 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pbx1P41778 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Pbx1P41778 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pbx1P41778 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pbx1P41778 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pbx1P41778 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pbx1P41778 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pbx1P41778 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pbx1P41778 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pbx1P41778 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pbx1P41778 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pbx1P41778 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pbx1P41778 Gm45504-201ENSMUST00000211407 2107 ntBASIC16.75■□□□□ 0.27
Pbx1P41778 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pbx1P41778 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pbx1P41778 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pbx1P41778 Gm37912-201ENSMUST00000191895 3076 ntBASIC16.75■□□□□ 0.27
Pbx1P41778 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pbx1P41778 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pbx1P41778 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Pbx1P41778 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pbx1P41778 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pbx1P41778 Gm44454-201ENSMUST00000198541 138 ntBASIC16.75■□□□□ 0.27
Pbx1P41778 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pbx1P41778 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pbx1P41778 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pbx1P41778 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pbx1P41778 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pbx1P41778 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pbx1P41778 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pbx1P41778 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pbx1P41778 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pbx1P41778 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pbx1P41778 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pbx1P41778 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.75■□□□□ 0.27
Pbx1P41778 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pbx1P41778 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pbx1P41778 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pbx1P41778 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Pbx1P41778 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pbx1P41778 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pbx1P41778 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pbx1P41778 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.74■□□□□ 0.27
Pbx1P41778 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Pbx1P41778 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pbx1P41778 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Pbx1P41778 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Pbx1P41778 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Pbx1P41778 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.74■□□□□ 0.27
Pbx1P41778 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pbx1P41778 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pbx1P41778 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Pbx1P41778 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Pbx1P41778 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pbx1P41778 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pbx1P41778 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.74■□□□□ 0.27
Pbx1P41778 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Pbx1P41778 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC16.74■□□□□ 0.27
Pbx1P41778 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Pbx1P41778 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pbx1P41778 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pbx1P41778 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pbx1P41778 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pbx1P41778 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Pbx1P41778 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pbx1P41778 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pbx1P41778 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pbx1P41778 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pbx1P41778 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pbx1P41778 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pbx1P41778 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pbx1P41778 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pbx1P41778 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Pbx1P41778 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms