Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Abca1P41233 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Abca1P41233 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Abca1P41233 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Abca1P41233 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Abca1P41233 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Abca1P41233 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Abca1P41233 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Abca1P41233 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Abca1P41233 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Abca1P41233 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Abca1P41233 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Abca1P41233 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Abca1P41233 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC12.93□□□□□ -0.34
Abca1P41233 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Abca1P41233 Wdyhv1-206ENSMUST00000227142 786 ntBASIC12.93□□□□□ -0.34
Abca1P41233 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Abca1P41233 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Abca1P41233 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Abca1P41233 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Abca1P41233 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Abca1P41233 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Abca1P41233 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Abca1P41233 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Abca1P41233 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Abca1P41233 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Abca1P41233 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Abca1P41233 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Abca1P41233 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.93□□□□□ -0.34
Abca1P41233 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Abca1P41233 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC12.93□□□□□ -0.34
Abca1P41233 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC12.93□□□□□ -0.34
Abca1P41233 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Abca1P41233 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Abca1P41233 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Abca1P41233 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Abca1P41233 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Abca1P41233 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Abca1P41233 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Abca1P41233 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Abca1P41233 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Abca1P41233 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Abca1P41233 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Abca1P41233 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
Abca1P41233 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Abca1P41233 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC12.93□□□□□ -0.34
Abca1P41233 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Abca1P41233 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Abca1P41233 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Abca1P41233 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Abca1P41233 AC139382.1-201ENSMUST00000221402 498 ntBASIC12.92□□□□□ -0.34
Abca1P41233 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Abca1P41233 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Abca1P41233 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Abca1P41233 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC12.92□□□□□ -0.34
Abca1P41233 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Abca1P41233 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Abca1P41233 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Abca1P41233 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Abca1P41233 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Abca1P41233 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Abca1P41233 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Abca1P41233 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Abca1P41233 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Abca1P41233 AC124549.3-201ENSMUST00000225541 367 ntBASIC12.92□□□□□ -0.34
Abca1P41233 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Abca1P41233 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Abca1P41233 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Abca1P41233 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Abca1P41233 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Abca1P41233 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Abca1P41233 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
Abca1P41233 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Abca1P41233 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Abca1P41233 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Abca1P41233 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Abca1P41233 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Abca1P41233 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Abca1P41233 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC12.91□□□□□ -0.34
Abca1P41233 Gm37171-201ENSMUST00000192636 1185 ntBASIC12.91□□□□□ -0.34
Abca1P41233 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Abca1P41233 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Abca1P41233 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Abca1P41233 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Abca1P41233 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Abca1P41233 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Abca1P41233 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Abca1P41233 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Abca1P41233 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Abca1P41233 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC12.91□□□□□ -0.34
Abca1P41233 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
Abca1P41233 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Abca1P41233 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Abca1P41233 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Abca1P41233 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Abca1P41233 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Abca1P41233 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC12.91□□□□□ -0.34
Abca1P41233 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Abca1P41233 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Abca1P41233 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms