Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.9□□□□□ -0.02
Cdh4P39038 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cdh4P39038 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cdh4P39038 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cdh4P39038 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdh4P39038 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdh4P39038 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdh4P39038 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdh4P39038 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdh4P39038 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdh4P39038 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdh4P39038 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdh4P39038 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
Cdh4P39038 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Cdh4P39038 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC14.89□□□□□ -0.03
Cdh4P39038 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.89□□□□□ -0.03
Cdh4P39038 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdh4P39038 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdh4P39038 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Cdh4P39038 Gm19164-201ENSMUST00000210667 640 ntBASIC14.89□□□□□ -0.03
Cdh4P39038 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.89□□□□□ -0.03
Cdh4P39038 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Cdh4P39038 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdh4P39038 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Cdh4P39038 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.89□□□□□ -0.03
Cdh4P39038 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdh4P39038 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdh4P39038 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdh4P39038 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdh4P39038 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdh4P39038 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdh4P39038 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdh4P39038 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cdh4P39038 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Cdh4P39038 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cdh4P39038 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdh4P39038 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Cdh4P39038 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cdh4P39038 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdh4P39038 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdh4P39038 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cdh4P39038 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.88□□□□□ -0.03
Cdh4P39038 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdh4P39038 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Cdh4P39038 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.88□□□□□ -0.03
Cdh4P39038 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Cdh4P39038 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC14.88□□□□□ -0.03
Cdh4P39038 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC14.88□□□□□ -0.03
Cdh4P39038 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cdh4P39038 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdh4P39038 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Cdh4P39038 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdh4P39038 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cdh4P39038 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.88□□□□□ -0.03
Cdh4P39038 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdh4P39038 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdh4P39038 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdh4P39038 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdh4P39038 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdh4P39038 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdh4P39038 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cdh4P39038 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdh4P39038 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdh4P39038 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdh4P39038 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdh4P39038 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.87□□□□□ -0.03
Cdh4P39038 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.87□□□□□ -0.03
Cdh4P39038 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdh4P39038 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cdh4P39038 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Cdh4P39038 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Cdh4P39038 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdh4P39038 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cdh4P39038 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdh4P39038 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdh4P39038 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cdh4P39038 Gm6089-201ENSMUST00000197666 938 ntBASIC14.87□□□□□ -0.03
Cdh4P39038 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cdh4P39038 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Cdh4P39038 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.87□□□□□ -0.03
Cdh4P39038 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdh4P39038 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdh4P39038 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdh4P39038 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdh4P39038 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdh4P39038 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdh4P39038 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Cdh4P39038 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cdh4P39038 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdh4P39038 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdh4P39038 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdh4P39038 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdh4P39038 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh4P39038 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh4P39038 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh4P39038 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh4P39038 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh4P39038 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.86□□□□□ -0.03
Cdh4P39038 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh4P39038 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms