Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.43□□□□□ -0.26
Slc6a1P31648 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Slc6a1P31648 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Slc6a1P31648 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Slc6a1P31648 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Slc6a1P31648 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Slc6a1P31648 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Slc6a1P31648 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Slc6a1P31648 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC13.43□□□□□ -0.26
Slc6a1P31648 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC13.43□□□□□ -0.26
Slc6a1P31648 Gm11539-201ENSMUST00000119837 557 ntBASIC13.43□□□□□ -0.26
Slc6a1P31648 Gm13436-201ENSMUST00000120418 567 ntBASIC13.43□□□□□ -0.26
Slc6a1P31648 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC13.43□□□□□ -0.26
Slc6a1P31648 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Slc6a1P31648 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Slc6a1P31648 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Slc6a1P31648 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Slc6a1P31648 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Slc6a1P31648 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Slc6a1P31648 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Slc6a1P31648 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Slc6a1P31648 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Slc6a1P31648 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Slc6a1P31648 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Slc6a1P31648 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Slc6a1P31648 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Slc6a1P31648 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Slc6a1P31648 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Slc6a1P31648 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Slc6a1P31648 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Slc6a1P31648 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Slc6a1P31648 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Slc6a1P31648 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Slc6a1P31648 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.42□□□□□ -0.26
Slc6a1P31648 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Slc6a1P31648 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Slc6a1P31648 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Slc6a1P31648 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Slc6a1P31648 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Slc6a1P31648 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Slc6a1P31648 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Slc6a1P31648 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC13.42□□□□□ -0.26
Slc6a1P31648 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Slc6a1P31648 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Slc6a1P31648 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Slc6a1P31648 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Slc6a1P31648 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC13.42□□□□□ -0.26
Slc6a1P31648 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Slc6a1P31648 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Slc6a1P31648 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Slc6a1P31648 Actl10-202ENSMUST00000226583 1501 ntBASIC13.42□□□□□ -0.26
Slc6a1P31648 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.42□□□□□ -0.26
Slc6a1P31648 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Slc6a1P31648 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Slc6a1P31648 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Slc6a1P31648 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Slc6a1P31648 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC13.42□□□□□ -0.26
Slc6a1P31648 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Slc6a1P31648 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Slc6a1P31648 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Slc6a1P31648 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Slc6a1P31648 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Slc6a1P31648 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Slc6a1P31648 Efs-202ENSMUST00000227037 2540 ntBASIC13.41□□□□□ -0.26
Slc6a1P31648 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Slc6a1P31648 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Slc6a1P31648 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Slc6a1P31648 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.41□□□□□ -0.26
Slc6a1P31648 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Slc6a1P31648 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC13.41□□□□□ -0.26
Slc6a1P31648 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC13.41□□□□□ -0.26
Slc6a1P31648 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Slc6a1P31648 Gm2274-201ENSMUST00000184539 609 ntBASIC13.41□□□□□ -0.26
Slc6a1P31648 Gm18959-201ENSMUST00000208954 655 ntBASIC13.41□□□□□ -0.26
Slc6a1P31648 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Slc6a1P31648 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Slc6a1P31648 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Slc6a1P31648 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Slc6a1P31648 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC13.41□□□□□ -0.26
Slc6a1P31648 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Slc6a1P31648 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Slc6a1P31648 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Slc6a1P31648 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Slc6a1P31648 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Slc6a1P31648 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Slc6a1P31648 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Slc6a1P31648 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Slc6a1P31648 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Slc6a1P31648 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Slc6a1P31648 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Slc6a1P31648 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Slc6a1P31648 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Slc6a1P31648 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.4□□□□□ -0.26
Slc6a1P31648 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Slc6a1P31648 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Slc6a1P31648 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Slc6a1P31648 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Slc6a1P31648 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Slc6a1P31648 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Slc6a1P31648 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms