Protein–RNA interactions for Protein: P24549

Aldh1a1, Retinal dehydrogenase 1, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aldh1a1P24549 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Aldh1a1P24549 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC16.66■□□□□ 0.26
Aldh1a1P24549 Gm18737-201ENSMUST00000173594 937 ntBASIC16.66■□□□□ 0.26
Aldh1a1P24549 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Aldh1a1P24549 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Aldh1a1P24549 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC16.66■□□□□ 0.26
Aldh1a1P24549 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Aldh1a1P24549 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC16.66■□□□□ 0.26
Aldh1a1P24549 Gm10154-201ENSMUST00000084445 354 ntBASIC16.66■□□□□ 0.26
Aldh1a1P24549 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
Aldh1a1P24549 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Aldh1a1P24549 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Aldh1a1P24549 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Aldh1a1P24549 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Aldh1a1P24549 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Aldh1a1P24549 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Aldh1a1P24549 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Aldh1a1P24549 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.65■□□□□ 0.26
Aldh1a1P24549 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Aldh1a1P24549 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC16.65■□□□□ 0.26
Aldh1a1P24549 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Aldh1a1P24549 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Aldh1a1P24549 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Aldh1a1P24549 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Aldh1a1P24549 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Aldh1a1P24549 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Aldh1a1P24549 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Aldh1a1P24549 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Aldh1a1P24549 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Aldh1a1P24549 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Aldh1a1P24549 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC16.65■□□□□ 0.26
Aldh1a1P24549 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC16.65■□□□□ 0.26
Aldh1a1P24549 AC125206.2-201ENSMUST00000217454 574 ntBASIC16.65■□□□□ 0.26
Aldh1a1P24549 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC16.65■□□□□ 0.26
Aldh1a1P24549 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Aldh1a1P24549 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Aldh1a1P24549 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.65■□□□□ 0.26
Aldh1a1P24549 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Aldh1a1P24549 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Aldh1a1P24549 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.65■□□□□ 0.26
Aldh1a1P24549 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Aldh1a1P24549 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Aldh1a1P24549 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Aldh1a1P24549 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Aldh1a1P24549 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Aldh1a1P24549 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Aldh1a1P24549 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Aldh1a1P24549 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Aldh1a1P24549 Haglr-201ENSMUST00000100000 2085 ntBASIC16.65■□□□□ 0.26
Aldh1a1P24549 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
Aldh1a1P24549 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Aldh1a1P24549 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Aldh1a1P24549 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Aldh1a1P24549 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Aldh1a1P24549 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Aldh1a1P24549 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Aldh1a1P24549 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Aldh1a1P24549 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Aldh1a1P24549 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC16.64■□□□□ 0.25
Aldh1a1P24549 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Aldh1a1P24549 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Aldh1a1P24549 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Aldh1a1P24549 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Aldh1a1P24549 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Aldh1a1P24549 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Aldh1a1P24549 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Aldh1a1P24549 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Aldh1a1P24549 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Aldh1a1P24549 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Aldh1a1P24549 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Aldh1a1P24549 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Aldh1a1P24549 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Aldh1a1P24549 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC16.63■□□□□ 0.25
Aldh1a1P24549 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.63■□□□□ 0.25
Aldh1a1P24549 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Aldh1a1P24549 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Aldh1a1P24549 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.63■□□□□ 0.25
Aldh1a1P24549 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC16.63■□□□□ 0.25
Aldh1a1P24549 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Aldh1a1P24549 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Aldh1a1P24549 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC16.63■□□□□ 0.25
Aldh1a1P24549 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC16.63■□□□□ 0.25
Aldh1a1P24549 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Aldh1a1P24549 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC16.63■□□□□ 0.25
Aldh1a1P24549 CT030684.1-201ENSMUST00000227292 914 ntBASIC16.63■□□□□ 0.25
Aldh1a1P24549 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Aldh1a1P24549 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
Aldh1a1P24549 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC16.63■□□□□ 0.25
Aldh1a1P24549 Grk6-207ENSMUST00000225925 2769 ntBASIC16.63■□□□□ 0.25
Aldh1a1P24549 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Aldh1a1P24549 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.63■□□□□ 0.25
Aldh1a1P24549 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Aldh1a1P24549 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Aldh1a1P24549 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Aldh1a1P24549 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.63■□□□□ 0.25
Aldh1a1P24549 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Aldh1a1P24549 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Aldh1a1P24549 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Aldh1a1P24549 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Aldh1a1P24549 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms