Protein–RNA interactions for Protein: P15388

Kcnc1, Potassium voltage-gated channel subfamily C member 1, mousemouse

Predictions only

Length 511 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnc1P15388 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Kcnc1P15388 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Kcnc1P15388 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Kcnc1P15388 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Kcnc1P15388 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.25■□□□□ 0.03
Kcnc1P15388 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Kcnc1P15388 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.25■□□□□ 0.03
Kcnc1P15388 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Kcnc1P15388 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.25■□□□□ 0.03
Kcnc1P15388 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Kcnc1P15388 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.25■□□□□ 0.03
Kcnc1P15388 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Kcnc1P15388 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Kcnc1P15388 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.25■□□□□ 0.03
Kcnc1P15388 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Kcnc1P15388 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Kcnc1P15388 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Kcnc1P15388 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Kcnc1P15388 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Kcnc1P15388 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Kcnc1P15388 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
Kcnc1P15388 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Kcnc1P15388 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Kcnc1P15388 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Kcnc1P15388 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Kcnc1P15388 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Kcnc1P15388 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Kcnc1P15388 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Kcnc1P15388 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Kcnc1P15388 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Kcnc1P15388 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
Kcnc1P15388 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Kcnc1P15388 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Kcnc1P15388 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
Kcnc1P15388 Gm27867-201ENSMUST00000184778 125 ntBASIC15.24■□□□□ 0.03
Kcnc1P15388 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Kcnc1P15388 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Kcnc1P15388 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Kcnc1P15388 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Kcnc1P15388 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Kcnc1P15388 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Kcnc1P15388 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.24■□□□□ 0.03
Kcnc1P15388 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Kcnc1P15388 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Kcnc1P15388 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Kcnc1P15388 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Kcnc1P15388 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Kcnc1P15388 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Kcnc1P15388 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Kcnc1P15388 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.24■□□□□ 0.03
Kcnc1P15388 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Kcnc1P15388 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.24■□□□□ 0.03
Kcnc1P15388 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Kcnc1P15388 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Kcnc1P15388 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Kcnc1P15388 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Kcnc1P15388 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.23■□□□□ 0.03
Kcnc1P15388 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.23■□□□□ 0.03
Kcnc1P15388 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Kcnc1P15388 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Kcnc1P15388 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.23■□□□□ 0.03
Kcnc1P15388 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Kcnc1P15388 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Kcnc1P15388 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Kcnc1P15388 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.23■□□□□ 0.03
Kcnc1P15388 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Kcnc1P15388 Gm25745-201ENSMUST00000174945 133 ntBASIC15.23■□□□□ 0.03
Kcnc1P15388 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.23■□□□□ 0.03
Kcnc1P15388 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Kcnc1P15388 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Kcnc1P15388 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Kcnc1P15388 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Kcnc1P15388 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Kcnc1P15388 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Kcnc1P15388 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Kcnc1P15388 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Kcnc1P15388 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC15.23■□□□□ 0.03
Kcnc1P15388 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Kcnc1P15388 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.22■□□□□ 0.03
Kcnc1P15388 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Kcnc1P15388 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Kcnc1P15388 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Kcnc1P15388 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Kcnc1P15388 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Kcnc1P15388 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Kcnc1P15388 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.22■□□□□ 0.03
Kcnc1P15388 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Kcnc1P15388 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Kcnc1P15388 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Kcnc1P15388 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Kcnc1P15388 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Kcnc1P15388 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Kcnc1P15388 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Kcnc1P15388 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.22■□□□□ 0.03
Kcnc1P15388 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Kcnc1P15388 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Kcnc1P15388 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Kcnc1P15388 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Kcnc1P15388 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.22■□□□□ 0.03
Kcnc1P15388 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms