Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ly6c1P0CW02 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ly6c1P0CW02 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC12.99□□□□□ -0.33
Ly6c1P0CW02 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ly6c1P0CW02 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ly6c1P0CW02 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ly6c1P0CW02 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ly6c1P0CW02 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ly6c1P0CW02 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ly6c1P0CW02 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC12.99□□□□□ -0.33
Ly6c1P0CW02 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC12.99□□□□□ -0.33
Ly6c1P0CW02 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ly6c1P0CW02 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ly6c1P0CW02 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ly6c1P0CW02 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ly6c1P0CW02 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Ly6c1P0CW02 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
Ly6c1P0CW02 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ly6c1P0CW02 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ly6c1P0CW02 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ly6c1P0CW02 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ly6c1P0CW02 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Ly6c1P0CW02 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Ly6c1P0CW02 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Ly6c1P0CW02 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ly6c1P0CW02 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ly6c1P0CW02 Dancr-204ENSMUST00000132389 2347 ntBASIC12.99□□□□□ -0.33
Ly6c1P0CW02 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Ly6c1P0CW02 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.98□□□□□ -0.33
Ly6c1P0CW02 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ly6c1P0CW02 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ly6c1P0CW02 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ly6c1P0CW02 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ly6c1P0CW02 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ly6c1P0CW02 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ly6c1P0CW02 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ly6c1P0CW02 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ly6c1P0CW02 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Ly6c1P0CW02 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ly6c1P0CW02 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ly6c1P0CW02 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC12.98□□□□□ -0.33
Ly6c1P0CW02 Gm2308-201ENSMUST00000166539 1004 ntBASIC12.98□□□□□ -0.33
Ly6c1P0CW02 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ly6c1P0CW02 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC12.98□□□□□ -0.33
Ly6c1P0CW02 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC12.98□□□□□ -0.33
Ly6c1P0CW02 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC12.98□□□□□ -0.33
Ly6c1P0CW02 Gm44136-201ENSMUST00000203819 1106 ntBASIC12.98□□□□□ -0.33
Ly6c1P0CW02 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ly6c1P0CW02 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.98□□□□□ -0.33
Ly6c1P0CW02 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ly6c1P0CW02 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ly6c1P0CW02 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ly6c1P0CW02 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Ly6c1P0CW02 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC12.98□□□□□ -0.33
Ly6c1P0CW02 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ly6c1P0CW02 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Ly6c1P0CW02 AC154527.4-201ENSMUST00000224364 1667 ntBASIC12.98□□□□□ -0.33
Ly6c1P0CW02 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ly6c1P0CW02 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ly6c1P0CW02 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ly6c1P0CW02 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ly6c1P0CW02 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ly6c1P0CW02 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Ly6c1P0CW02 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ly6c1P0CW02 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ly6c1P0CW02 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC12.97□□□□□ -0.33
Ly6c1P0CW02 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ly6c1P0CW02 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ly6c1P0CW02 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ly6c1P0CW02 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ly6c1P0CW02 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12.97□□□□□ -0.33
Ly6c1P0CW02 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ly6c1P0CW02 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ly6c1P0CW02 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ly6c1P0CW02 Gm11185-201ENSMUST00000117732 1007 ntBASIC12.97□□□□□ -0.33
Ly6c1P0CW02 Gm13036-201ENSMUST00000117799 748 ntBASIC12.97□□□□□ -0.33
Ly6c1P0CW02 Gm6184-201ENSMUST00000120403 1261 ntBASIC12.97□□□□□ -0.33
Ly6c1P0CW02 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC12.97□□□□□ -0.33
Ly6c1P0CW02 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ly6c1P0CW02 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC12.97□□□□□ -0.33
Ly6c1P0CW02 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC12.97□□□□□ -0.33
Ly6c1P0CW02 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ly6c1P0CW02 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC12.97□□□□□ -0.33
Ly6c1P0CW02 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ly6c1P0CW02 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ly6c1P0CW02 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ly6c1P0CW02 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ly6c1P0CW02 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ly6c1P0CW02 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ly6c1P0CW02 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ly6c1P0CW02 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ly6c1P0CW02 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ly6c1P0CW02 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ly6c1P0CW02 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ly6c1P0CW02 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ly6c1P0CW02 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ly6c1P0CW02 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ly6c1P0CW02 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ly6c1P0CW02 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ly6c1P0CW02 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms