Protein–RNA interactions for Protein: P08775

Polr2a, DNA-directed RNA polymerase II subunit RPB1, mousemouse

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2aP08775 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Polr2aP08775 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Polr2aP08775 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Polr2aP08775 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Polr2aP08775 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Polr2aP08775 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Polr2aP08775 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC17.57■□□□□ 0.4
Polr2aP08775 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC17.57■□□□□ 0.4
Polr2aP08775 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Polr2aP08775 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Polr2aP08775 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Polr2aP08775 AC124751.1-201ENSMUST00000222716 1408 ntBASIC17.57■□□□□ 0.4
Polr2aP08775 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Polr2aP08775 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC17.56■□□□□ 0.4
Polr2aP08775 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Polr2aP08775 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Polr2aP08775 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Polr2aP08775 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Polr2aP08775 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Polr2aP08775 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Polr2aP08775 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.55■□□□□ 0.4
Polr2aP08775 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Polr2aP08775 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Polr2aP08775 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Polr2aP08775 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Polr2aP08775 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Polr2aP08775 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC17.55■□□□□ 0.4
Polr2aP08775 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Polr2aP08775 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Polr2aP08775 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Polr2aP08775 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Polr2aP08775 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Polr2aP08775 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Polr2aP08775 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.55■□□□□ 0.4
Polr2aP08775 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Polr2aP08775 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Polr2aP08775 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Polr2aP08775 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Polr2aP08775 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Polr2aP08775 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Polr2aP08775 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Polr2aP08775 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Polr2aP08775 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC17.55■□□□□ 0.4
Polr2aP08775 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Polr2aP08775 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Polr2aP08775 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC17.55■□□□□ 0.4
Polr2aP08775 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Polr2aP08775 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Polr2aP08775 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Polr2aP08775 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Polr2aP08775 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.55■□□□□ 0.4
Polr2aP08775 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Polr2aP08775 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Polr2aP08775 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Polr2aP08775 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Polr2aP08775 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.54■□□□□ 0.4
Polr2aP08775 Gm45384-201ENSMUST00000210451 277 ntBASIC17.54■□□□□ 0.4
Polr2aP08775 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Polr2aP08775 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Polr2aP08775 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Polr2aP08775 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Polr2aP08775 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Polr2aP08775 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Polr2aP08775 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Polr2aP08775 Asic1-205ENSMUST00000228185 1818 ntBASIC17.54■□□□□ 0.4
Polr2aP08775 Shd-206ENSMUST00000225145 998 ntBASIC17.53■□□□□ 0.4
Polr2aP08775 AC154239.3-201ENSMUST00000226933 674 ntBASIC17.53■□□□□ 0.4
Polr2aP08775 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Polr2aP08775 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Polr2aP08775 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Polr2aP08775 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Polr2aP08775 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Polr2aP08775 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Polr2aP08775 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Polr2aP08775 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Polr2aP08775 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Polr2aP08775 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Polr2aP08775 Gm9719-201ENSMUST00000162765 543 ntBASIC17.53■□□□□ 0.4
Polr2aP08775 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC17.53■□□□□ 0.4
Polr2aP08775 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Polr2aP08775 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Polr2aP08775 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Polr2aP08775 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.53■□□□□ 0.4
Polr2aP08775 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Polr2aP08775 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Polr2aP08775 Gm6263-201ENSMUST00000120029 1342 ntBASIC17.52■□□□□ 0.4
Polr2aP08775 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Polr2aP08775 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Polr2aP08775 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC17.52■□□□□ 0.4
Polr2aP08775 Gm14042-201ENSMUST00000120139 833 ntBASIC17.52■□□□□ 0.4
Polr2aP08775 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC17.52■□□□□ 0.4
Polr2aP08775 CT010506.4-201ENSMUST00000225457 351 ntBASIC17.52■□□□□ 0.4
Polr2aP08775 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Polr2aP08775 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Polr2aP08775 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.52■□□□□ 0.39
Polr2aP08775 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Polr2aP08775 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Polr2aP08775 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.39
Polr2aP08775 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC17.51■□□□□ 0.39
Polr2aP08775 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms