Protein–RNA interactions for Protein: P06336

Ig epsilon chain C region, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06336 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
P06336 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
P06336 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
P06336 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
P06336 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
P06336 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
P06336 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
P06336 Gm7862-201ENSMUST00000121461 292 ntBASIC14.36□□□□□ -0.11
P06336 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
P06336 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.36□□□□□ -0.11
P06336 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.36□□□□□ -0.11
P06336 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
P06336 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
P06336 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
P06336 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
P06336 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
P06336 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
P06336 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
P06336 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
P06336 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
P06336 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
P06336 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
P06336 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
P06336 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
P06336 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
P06336 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
P06336 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.35□□□□□ -0.11
P06336 Gm27646-201ENSMUST00000183989 110 ntBASIC14.35□□□□□ -0.11
P06336 Gm6089-201ENSMUST00000197666 938 ntBASIC14.35□□□□□ -0.11
P06336 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
P06336 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.35□□□□□ -0.11
P06336 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.35□□□□□ -0.11
P06336 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.35□□□□□ -0.11
P06336 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
P06336 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.35□□□□□ -0.11
P06336 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.35□□□□□ -0.11
P06336 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
P06336 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
P06336 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
P06336 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
P06336 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
P06336 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
P06336 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
P06336 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
P06336 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
P06336 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
P06336 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
P06336 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
P06336 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.35□□□□□ -0.11
P06336 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
P06336 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
P06336 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
P06336 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
P06336 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.34□□□□□ -0.11
P06336 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.34□□□□□ -0.11
P06336 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
P06336 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P06336 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.34□□□□□ -0.11
P06336 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
P06336 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P06336 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P06336 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
P06336 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.34□□□□□ -0.11
P06336 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
P06336 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
P06336 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P06336 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.34□□□□□ -0.11
P06336 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P06336 Gm7461-201ENSMUST00000058918 827 ntBASIC14.34□□□□□ -0.11
P06336 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
P06336 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
P06336 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P06336 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
P06336 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P06336 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P06336 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
P06336 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P06336 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P06336 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
P06336 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P06336 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
P06336 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
P06336 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.33□□□□□ -0.11
P06336 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
P06336 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
P06336 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
P06336 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P06336 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
P06336 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
P06336 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
P06336 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P06336 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
P06336 Gm15358-201ENSMUST00000119249 520 ntBASIC14.33□□□□□ -0.12
P06336 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
P06336 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P06336 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.33□□□□□ -0.12
P06336 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P06336 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P06336 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
P06336 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms