Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
P04224 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
P04224 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
P04224 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
P04224 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
P04224 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
P04224 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
P04224 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
P04224 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
P04224 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
P04224 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
P04224 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
P04224 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
P04224 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
P04224 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
P04224 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.69□□□□□ -0.22
P04224 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
P04224 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
P04224 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
P04224 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
P04224 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
P04224 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
P04224 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
P04224 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
P04224 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
P04224 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
P04224 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
P04224 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
P04224 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
P04224 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
P04224 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
P04224 CT025689.6-201ENSMUST00000224991 1104 ntBASIC13.68□□□□□ -0.22
P04224 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC13.68□□□□□ -0.22
P04224 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
P04224 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
P04224 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
P04224 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
P04224 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
P04224 Actl10-202ENSMUST00000226583 1501 ntBASIC13.68□□□□□ -0.22
P04224 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
P04224 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
P04224 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
P04224 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
P04224 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
P04224 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
P04224 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
P04224 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
P04224 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
P04224 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
P04224 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
P04224 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
P04224 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
P04224 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
P04224 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC13.67□□□□□ -0.22
P04224 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
P04224 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
P04224 AC153881.1-201ENSMUST00000214448 284 ntBASIC13.67□□□□□ -0.22
P04224 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
P04224 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.67□□□□□ -0.22
P04224 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
P04224 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
P04224 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
P04224 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
P04224 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
P04224 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
P04224 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
P04224 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
P04224 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
P04224 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
P04224 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
P04224 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
P04224 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
P04224 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04224 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04224 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04224 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04224 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04224 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04224 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
P04224 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04224 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04224 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04224 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04224 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04224 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04224 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04224 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
P04224 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04224 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
P04224 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
P04224 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
P04224 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04224 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
P04224 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04224 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04224 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04224 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
P04224 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04224 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
P04224 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms