Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hoxa3P02831 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hoxa3P02831 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hoxa3P02831 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Hoxa3P02831 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC13.05□□□□□ -0.32
Hoxa3P02831 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hoxa3P02831 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Hoxa3P02831 Gm16011-201ENSMUST00000121567 2662 ntBASIC13.05□□□□□ -0.32
Hoxa3P02831 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hoxa3P02831 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hoxa3P02831 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC13.04□□□□□ -0.32
Hoxa3P02831 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hoxa3P02831 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Hoxa3P02831 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hoxa3P02831 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC13.04□□□□□ -0.32
Hoxa3P02831 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Hoxa3P02831 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Hoxa3P02831 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hoxa3P02831 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Hoxa3P02831 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Hoxa3P02831 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.04□□□□□ -0.32
Hoxa3P02831 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hoxa3P02831 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hoxa3P02831 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.04□□□□□ -0.32
Hoxa3P02831 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Hoxa3P02831 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC13.04□□□□□ -0.32
Hoxa3P02831 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Hoxa3P02831 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Hoxa3P02831 Gm6550-201ENSMUST00000187574 993 ntBASIC13.04□□□□□ -0.32
Hoxa3P02831 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Hoxa3P02831 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Hoxa3P02831 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.04□□□□□ -0.32
Hoxa3P02831 Gm15590-201ENSMUST00000078419 552 ntBASIC13.04□□□□□ -0.32
Hoxa3P02831 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hoxa3P02831 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Hoxa3P02831 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hoxa3P02831 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hoxa3P02831 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Hoxa3P02831 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Hoxa3P02831 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Hoxa3P02831 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Hoxa3P02831 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Hoxa3P02831 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hoxa3P02831 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hoxa3P02831 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hoxa3P02831 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC13.04□□□□□ -0.32
Hoxa3P02831 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hoxa3P02831 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxa3P02831 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxa3P02831 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxa3P02831 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxa3P02831 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxa3P02831 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxa3P02831 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC13.03□□□□□ -0.32
Hoxa3P02831 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxa3P02831 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxa3P02831 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxa3P02831 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
Hoxa3P02831 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxa3P02831 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxa3P02831 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxa3P02831 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC13.03□□□□□ -0.32
Hoxa3P02831 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC13.03□□□□□ -0.32
Hoxa3P02831 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC13.03□□□□□ -0.32
Hoxa3P02831 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.03□□□□□ -0.32
Hoxa3P02831 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.03□□□□□ -0.32
Hoxa3P02831 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC13.03□□□□□ -0.32
Hoxa3P02831 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC13.03□□□□□ -0.32
Hoxa3P02831 Gm18622-201ENSMUST00000219361 595 ntBASIC13.03□□□□□ -0.32
Hoxa3P02831 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC13.03□□□□□ -0.32
Hoxa3P02831 AC154757.1-201ENSMUST00000228289 336 ntBASIC13.03□□□□□ -0.32
Hoxa3P02831 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxa3P02831 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxa3P02831 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Hoxa3P02831 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxa3P02831 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxa3P02831 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxa3P02831 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxa3P02831 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxa3P02831 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Hoxa3P02831 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Hoxa3P02831 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxa3P02831 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hoxa3P02831 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hoxa3P02831 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hoxa3P02831 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Hoxa3P02831 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hoxa3P02831 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC13.02□□□□□ -0.32
Hoxa3P02831 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hoxa3P02831 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Hoxa3P02831 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hoxa3P02831 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hoxa3P02831 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hoxa3P02831 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxa3P02831 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxa3P02831 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxa3P02831 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxa3P02831 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Hoxa3P02831 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC13.02□□□□□ -0.33
Hoxa3P02831 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms