Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Igh-VJ558P01758 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Igh-VJ558P01758 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Igh-VJ558P01758 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Igh-VJ558P01758 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Igh-VJ558P01758 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.46□□□□□ -0.26
Igh-VJ558P01758 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Igh-VJ558P01758 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Igh-VJ558P01758 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Igh-VJ558P01758 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Igh-VJ558P01758 Grk6-207ENSMUST00000225925 2769 ntBASIC13.45□□□□□ -0.26
Igh-VJ558P01758 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Igh-VJ558P01758 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.45□□□□□ -0.26
Igh-VJ558P01758 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Igh-VJ558P01758 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Igh-VJ558P01758 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Igh-VJ558P01758 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
Igh-VJ558P01758 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Igh-VJ558P01758 Gm15358-201ENSMUST00000119249 520 ntBASIC13.45□□□□□ -0.26
Igh-VJ558P01758 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.45□□□□□ -0.26
Igh-VJ558P01758 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC13.45□□□□□ -0.26
Igh-VJ558P01758 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC13.45□□□□□ -0.26
Igh-VJ558P01758 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Igh-VJ558P01758 Gm28033-201ENSMUST00000184224 96 ntBASIC13.45□□□□□ -0.26
Igh-VJ558P01758 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC13.45□□□□□ -0.26
Igh-VJ558P01758 AC093926.2-201ENSMUST00000214468 1228 ntBASIC13.45□□□□□ -0.26
Igh-VJ558P01758 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Igh-VJ558P01758 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Igh-VJ558P01758 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Igh-VJ558P01758 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Igh-VJ558P01758 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Igh-VJ558P01758 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Igh-VJ558P01758 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Igh-VJ558P01758 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Igh-VJ558P01758 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Igh-VJ558P01758 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Igh-VJ558P01758 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Igh-VJ558P01758 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Igh-VJ558P01758 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.45□□□□□ -0.26
Igh-VJ558P01758 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Igh-VJ558P01758 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Igh-VJ558P01758 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Igh-VJ558P01758 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Igh-VJ558P01758 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Igh-VJ558P01758 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Igh-VJ558P01758 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Igh-VJ558P01758 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Igh-VJ558P01758 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.44□□□□□ -0.26
Igh-VJ558P01758 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Igh-VJ558P01758 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC13.44□□□□□ -0.26
Igh-VJ558P01758 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC13.44□□□□□ -0.26
Igh-VJ558P01758 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Igh-VJ558P01758 Gm13830-205ENSMUST00000201195 1155 ntBASIC13.44□□□□□ -0.26
Igh-VJ558P01758 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC13.44□□□□□ -0.26
Igh-VJ558P01758 Rbfox2-207ENSMUST00000227533 1041 ntBASIC13.44□□□□□ -0.26
Igh-VJ558P01758 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Igh-VJ558P01758 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Igh-VJ558P01758 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Igh-VJ558P01758 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Igh-VJ558P01758 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Igh-VJ558P01758 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Igh-VJ558P01758 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Igh-VJ558P01758 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC13.44□□□□□ -0.26
Igh-VJ558P01758 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Igh-VJ558P01758 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Igh-VJ558P01758 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Igh-VJ558P01758 Gm10584-201ENSMUST00000207036 2628 ntBASIC13.43□□□□□ -0.26
Igh-VJ558P01758 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Igh-VJ558P01758 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Igh-VJ558P01758 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Igh-VJ558P01758 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Igh-VJ558P01758 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Igh-VJ558P01758 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Igh-VJ558P01758 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Igh-VJ558P01758 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Igh-VJ558P01758 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Igh-VJ558P01758 Gm21362-201ENSMUST00000194272 928 ntBASIC13.43□□□□□ -0.26
Igh-VJ558P01758 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC13.43□□□□□ -0.26
Igh-VJ558P01758 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Igh-VJ558P01758 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Igh-VJ558P01758 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Igh-VJ558P01758 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Igh-VJ558P01758 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Igh-VJ558P01758 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC13.43□□□□□ -0.26
Igh-VJ558P01758 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Igh-VJ558P01758 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Igh-VJ558P01758 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Igh-VJ558P01758 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Igh-VJ558P01758 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Igh-VJ558P01758 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Igh-VJ558P01758 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Igh-VJ558P01758 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Igh-VJ558P01758 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Igh-VJ558P01758 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Igh-VJ558P01758 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Igh-VJ558P01758 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Igh-VJ558P01758 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Igh-VJ558P01758 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Igh-VJ558P01758 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Igh-VJ558P01758 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms