Protein–RNA interactions for Protein: O88974

Setdb1, Histone-lysine N-methyltransferase SETDB1, mousemouse

Predictions only

Length 1,307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Setdb1O88974 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
Setdb1O88974 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Setdb1O88974 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Setdb1O88974 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Setdb1O88974 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Setdb1O88974 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Setdb1O88974 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
Setdb1O88974 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Setdb1O88974 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC18.93■□□□□ 0.62
Setdb1O88974 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Setdb1O88974 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC18.93■□□□□ 0.62
Setdb1O88974 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
Setdb1O88974 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC18.93■□□□□ 0.62
Setdb1O88974 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC18.93■□□□□ 0.62
Setdb1O88974 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC18.93■□□□□ 0.62
Setdb1O88974 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Setdb1O88974 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Setdb1O88974 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Setdb1O88974 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Setdb1O88974 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Setdb1O88974 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Setdb1O88974 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC18.92■□□□□ 0.62
Setdb1O88974 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Setdb1O88974 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Setdb1O88974 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Setdb1O88974 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Setdb1O88974 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Setdb1O88974 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC18.92■□□□□ 0.62
Setdb1O88974 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC18.92■□□□□ 0.62
Setdb1O88974 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Setdb1O88974 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
Setdb1O88974 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Setdb1O88974 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC18.92■□□□□ 0.62
Setdb1O88974 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Setdb1O88974 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Setdb1O88974 Gm20553-201ENSMUST00000204205 844 ntBASIC18.92■□□□□ 0.62
Setdb1O88974 AC158538.2-201ENSMUST00000225455 906 ntBASIC18.92■□□□□ 0.62
Setdb1O88974 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Setdb1O88974 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Setdb1O88974 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Setdb1O88974 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Setdb1O88974 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Setdb1O88974 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Setdb1O88974 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Setdb1O88974 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Setdb1O88974 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Setdb1O88974 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Setdb1O88974 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC18.91■□□□□ 0.62
Setdb1O88974 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Setdb1O88974 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Setdb1O88974 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Setdb1O88974 Gm6226-201ENSMUST00000117765 1146 ntBASIC18.91■□□□□ 0.62
Setdb1O88974 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Setdb1O88974 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Setdb1O88974 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Setdb1O88974 Gm18889-201ENSMUST00000174284 929 ntBASIC18.91■□□□□ 0.62
Setdb1O88974 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Setdb1O88974 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Setdb1O88974 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Setdb1O88974 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Setdb1O88974 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Setdb1O88974 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Setdb1O88974 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Setdb1O88974 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Setdb1O88974 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Setdb1O88974 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Setdb1O88974 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Setdb1O88974 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Setdb1O88974 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC18.9■□□□□ 0.62
Setdb1O88974 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Setdb1O88974 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Setdb1O88974 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Setdb1O88974 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Setdb1O88974 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Setdb1O88974 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Setdb1O88974 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Setdb1O88974 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC18.9■□□□□ 0.62
Setdb1O88974 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC18.9■□□□□ 0.62
Setdb1O88974 AC125206.2-201ENSMUST00000217454 574 ntBASIC18.9■□□□□ 0.62
Setdb1O88974 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Setdb1O88974 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Setdb1O88974 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Setdb1O88974 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Setdb1O88974 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Setdb1O88974 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Setdb1O88974 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Setdb1O88974 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Setdb1O88974 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Setdb1O88974 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Setdb1O88974 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Setdb1O88974 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Setdb1O88974 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC18.9■□□□□ 0.62
Setdb1O88974 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Setdb1O88974 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Setdb1O88974 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Setdb1O88974 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Setdb1O88974 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Setdb1O88974 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Setdb1O88974 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Setdb1O88974 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms