Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Best1O88870 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Best1O88870 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Best1O88870 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Best1O88870 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Best1O88870 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Best1O88870 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Best1O88870 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Best1O88870 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Best1O88870 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Best1O88870 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Best1O88870 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Best1O88870 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Best1O88870 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Best1O88870 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.93□□□□□ -0.02
Best1O88870 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.93□□□□□ -0.02
Best1O88870 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Best1O88870 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Best1O88870 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Best1O88870 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.93□□□□□ -0.02
Best1O88870 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Best1O88870 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Best1O88870 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Best1O88870 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Best1O88870 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Best1O88870 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Best1O88870 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.92□□□□□ -0.02
Best1O88870 Gm37437-201ENSMUST00000194451 1937 ntBASIC14.92□□□□□ -0.02
Best1O88870 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Best1O88870 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
Best1O88870 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.92□□□□□ -0.02
Best1O88870 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Best1O88870 Gm13597-201ENSMUST00000121239 375 ntBASIC14.92□□□□□ -0.02
Best1O88870 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.92□□□□□ -0.02
Best1O88870 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
Best1O88870 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Best1O88870 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Best1O88870 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Best1O88870 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Best1O88870 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Best1O88870 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Best1O88870 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.92□□□□□ -0.02
Best1O88870 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Best1O88870 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Best1O88870 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Best1O88870 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Best1O88870 Grk6-207ENSMUST00000225925 2769 ntBASIC14.91□□□□□ -0.02
Best1O88870 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Best1O88870 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Best1O88870 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Best1O88870 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Best1O88870 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.91□□□□□ -0.02
Best1O88870 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.91□□□□□ -0.02
Best1O88870 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Best1O88870 Gm10499-201ENSMUST00000174094 934 ntBASIC14.91□□□□□ -0.02
Best1O88870 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Best1O88870 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Best1O88870 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.91□□□□□ -0.02
Best1O88870 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Best1O88870 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Best1O88870 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Best1O88870 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Best1O88870 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Best1O88870 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Best1O88870 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Best1O88870 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Best1O88870 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Best1O88870 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Best1O88870 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Best1O88870 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Best1O88870 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Best1O88870 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Best1O88870 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Best1O88870 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Best1O88870 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Best1O88870 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Best1O88870 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Best1O88870 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Best1O88870 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.9□□□□□ -0.02
Best1O88870 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Best1O88870 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Best1O88870 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.9□□□□□ -0.02
Best1O88870 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Best1O88870 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Best1O88870 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.9□□□□□ -0.02
Best1O88870 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Best1O88870 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.9□□□□□ -0.02
Best1O88870 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.9□□□□□ -0.02
Best1O88870 Gm5867-201ENSMUST00000063197 592 ntBASIC14.9□□□□□ -0.02
Best1O88870 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Best1O88870 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Best1O88870 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Best1O88870 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Best1O88870 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Best1O88870 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Best1O88870 Gm45412-201ENSMUST00000210217 2275 ntBASIC14.9□□□□□ -0.02
Best1O88870 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Best1O88870 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Best1O88870 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.89□□□□□ -0.03
Best1O88870 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms