Protein–RNA interactions for Protein: O88520

Shoc2, Leucine-rich repeat protein SHOC-2, mousemouse

Known RBP Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shoc2O88520 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.09■□□□□ 0.17
Shoc2O88520 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.09■□□□□ 0.17
Shoc2O88520 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.09■□□□□ 0.17
Shoc2O88520 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.09■□□□□ 0.17
Shoc2O88520 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.09■□□□□ 0.17
Shoc2O88520 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Shoc2O88520 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Shoc2O88520 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
Shoc2O88520 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Shoc2O88520 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Shoc2O88520 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Shoc2O88520 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Shoc2O88520 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Shoc2O88520 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Shoc2O88520 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Shoc2O88520 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Shoc2O88520 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Shoc2O88520 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Shoc2O88520 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Shoc2O88520 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.08■□□□□ 0.17
Shoc2O88520 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Shoc2O88520 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Shoc2O88520 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Shoc2O88520 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Shoc2O88520 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Shoc2O88520 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Shoc2O88520 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.08■□□□□ 0.16
Shoc2O88520 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
Shoc2O88520 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.08■□□□□ 0.16
Shoc2O88520 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Shoc2O88520 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Shoc2O88520 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Shoc2O88520 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Shoc2O88520 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Shoc2O88520 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Shoc2O88520 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Shoc2O88520 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.08■□□□□ 0.16
Shoc2O88520 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Shoc2O88520 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Shoc2O88520 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Shoc2O88520 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Shoc2O88520 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Shoc2O88520 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
Shoc2O88520 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shoc2O88520 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Shoc2O88520 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shoc2O88520 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Shoc2O88520 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shoc2O88520 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
Shoc2O88520 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shoc2O88520 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shoc2O88520 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
Shoc2O88520 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shoc2O88520 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.07■□□□□ 0.16
Shoc2O88520 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Shoc2O88520 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.07■□□□□ 0.16
Shoc2O88520 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.07■□□□□ 0.16
Shoc2O88520 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shoc2O88520 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
Shoc2O88520 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
Shoc2O88520 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shoc2O88520 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Shoc2O88520 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Shoc2O88520 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shoc2O88520 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shoc2O88520 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shoc2O88520 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shoc2O88520 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shoc2O88520 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Shoc2O88520 Gm10584-201ENSMUST00000207036 2628 ntBASIC16.07■□□□□ 0.16
Shoc2O88520 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shoc2O88520 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Shoc2O88520 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shoc2O88520 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Shoc2O88520 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shoc2O88520 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Shoc2O88520 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.06■□□□□ 0.16
Shoc2O88520 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC16.06■□□□□ 0.16
Shoc2O88520 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shoc2O88520 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shoc2O88520 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Shoc2O88520 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.06■□□□□ 0.16
Shoc2O88520 Gm24589-201ENSMUST00000116692 94 ntBASIC16.06■□□□□ 0.16
Shoc2O88520 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.06■□□□□ 0.16
Shoc2O88520 Gm25406-201ENSMUST00000157599 105 ntBASIC16.06■□□□□ 0.16
Shoc2O88520 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Shoc2O88520 Gm34391-201ENSMUST00000203706 907 ntBASIC16.06■□□□□ 0.16
Shoc2O88520 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shoc2O88520 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Shoc2O88520 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shoc2O88520 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shoc2O88520 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Shoc2O88520 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shoc2O88520 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Shoc2O88520 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shoc2O88520 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shoc2O88520 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shoc2O88520 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.05■□□□□ 0.16
Shoc2O88520 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shoc2O88520 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms