Protein–RNA interactions for Protein: O88456

Capns1, Calpain small subunit 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capns1O88456 Gm18421-201ENSMUST00000204122 625 ntBASIC14.42□□□□□ -0.1
Capns1O88456 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Capns1O88456 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Capns1O88456 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Capns1O88456 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Capns1O88456 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Capns1O88456 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Capns1O88456 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Capns1O88456 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Capns1O88456 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Capns1O88456 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Capns1O88456 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Capns1O88456 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Capns1O88456 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Capns1O88456 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Capns1O88456 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Capns1O88456 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Capns1O88456 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Capns1O88456 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Capns1O88456 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Capns1O88456 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.41□□□□□ -0.1
Capns1O88456 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Capns1O88456 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Capns1O88456 Gm27389-201ENSMUST00000183622 195 ntBASIC14.41□□□□□ -0.1
Capns1O88456 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.41□□□□□ -0.1
Capns1O88456 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.41□□□□□ -0.1
Capns1O88456 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC14.41□□□□□ -0.1
Capns1O88456 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Capns1O88456 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Capns1O88456 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Capns1O88456 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Capns1O88456 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Capns1O88456 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Capns1O88456 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Capns1O88456 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Capns1O88456 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Capns1O88456 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Capns1O88456 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Capns1O88456 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC14.41□□□□□ -0.1
Capns1O88456 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Capns1O88456 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Capns1O88456 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Capns1O88456 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Capns1O88456 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Capns1O88456 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Capns1O88456 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Capns1O88456 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Capns1O88456 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Capns1O88456 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Capns1O88456 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.4□□□□□ -0.1
Capns1O88456 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Capns1O88456 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Capns1O88456 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Capns1O88456 Gm25925-201ENSMUST00000158314 306 ntBASIC14.4□□□□□ -0.1
Capns1O88456 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Capns1O88456 Mir1668-201ENSMUST00000184114 107 ntBASIC14.4□□□□□ -0.1
Capns1O88456 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.4□□□□□ -0.1
Capns1O88456 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Capns1O88456 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Capns1O88456 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Capns1O88456 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Capns1O88456 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.4□□□□□ -0.1
Capns1O88456 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Capns1O88456 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Capns1O88456 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.4□□□□□ -0.1
Capns1O88456 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.4□□□□□ -0.1
Capns1O88456 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Capns1O88456 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Capns1O88456 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Capns1O88456 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Capns1O88456 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Capns1O88456 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.39□□□□□ -0.11
Capns1O88456 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Capns1O88456 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.39□□□□□ -0.11
Capns1O88456 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Capns1O88456 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Capns1O88456 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.39□□□□□ -0.11
Capns1O88456 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Capns1O88456 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Capns1O88456 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Capns1O88456 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Capns1O88456 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.39□□□□□ -0.11
Capns1O88456 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.39□□□□□ -0.11
Capns1O88456 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.39□□□□□ -0.11
Capns1O88456 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Capns1O88456 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Capns1O88456 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Capns1O88456 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Capns1O88456 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Capns1O88456 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Capns1O88456 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Capns1O88456 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Capns1O88456 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Capns1O88456 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Capns1O88456 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Capns1O88456 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Capns1O88456 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Capns1O88456 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Capns1O88456 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Capns1O88456 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms